Methanospirillum lacunae: ACKUB0_04545
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Entry
ACKUB0_04545 CDS
T11317
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
mlaa Methanospirillum lacunae
Pathway
mlaa00750
Vitamin B6 metabolism
mlaa01100
Metabolic pathways
mlaa01240
Biosynthesis of cofactors
Module
mlaa_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
mlaa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ACKUB0_04545 (pdxS)
Enzymes [BR:
mlaa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ACKUB0_04545 (pdxS)
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Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
IGPS
NanE
Ribosomal_S5_C
DUF561
DUF5784
Motif
Other DBs
NCBI-ProteinID:
XLR76698
LinkDB
All DBs
Position
complement(915422..916318)
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AA seq
298 aa
AA seq
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MKLEELRYGTELIKRGFASMQKGGVIMDVVNAEQAGIAEEAGAVAVMALERVPADIRAAG
GVARMSDPGMIKEIIDKVSIPVMAKARIGHFVEAQVLQALGVDMIDESEVLTPADEEFHI
DKKQFTVPFVCGARDLGEALRRINEGAAMIRTKGEAGTGNVVEAVRHNRTILGEIRRLKG
LEETELIRRARELEAPADLLIETAKRQRLPVVNFSAGGIATPADAALMMQLGSDGVFVGS
GIFKSQNPTKMAKAIVEAVNHFNEPEVIAEVSRGLGEPMRGIEVHTLPPEERLASRGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgaagaacttcggtacggcactgaactgatcaagcgcggattcgcatccatg
cagaagggcggtgtaattatggatgtggtgaacgctgaacaggccgggatcgccgaagaa
gcgggggctgttgcagttatggccctcgaacgggttccggcagatatcagagcagcaggt
ggtgtggcacgtatgtcagatccggggatgatcaaggagatcatcgataaggtctctatc
ccggtgatggcaaaggcaaggatcggccactttgttgaggcgcaggtcctgcaggcactc
ggggtagatatgatagatgaatccgaggttctcacccctgctgatgaagagttccatatc
gataaaaaacagtttacagttccctttgtgtgtggtgcccgcgaccttggtgaggcactc
cgccgaatcaatgaaggagcggccatgataaggaccaagggagaggcaggaaccggtaat
gttgtcgaggctgtacgacacaaccgtacgatccttggagagatccgcaggctgaaaggt
cttgaggagactgagcttatcaggagggctcgcgaacttgaagctccggctgatcttctg
attgagactgctaagcggcagcgtctcccggtggtcaacttctctgccggtggtatcgcc
acacccgcagatgctgcgttgatgatgcagcttggcagtgatggtgtctttgtgggatca
gggatatttaaatcacagaatccgacaaagatggcgaaggctattgtggaagcagtcaac
cacttcaatgagcctgaagtgatcgctgaagtctcccggggtcttggtgaaccgatgcgg
gggatagaggtacacaccctccctcctgaagagaggctggcttcacgtggatggtaa
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