Mesoplasma lactucae: CP520_02880
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Entry
CP520_02880 CDS
T05127
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mlac
Mesoplasma lactucae
Pathway
mlac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP520_02880 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlac03021
]
CP520_02880 (rpoC)
03400 DNA repair and recombination proteins [BR:
mlac03400
]
CP520_02880 (rpoC)
Enzymes [BR:
mlac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP520_02880 (rpoC)
Transcription machinery [BR:
mlac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP520_02880 (rpoC)
DNA repair and recombination proteins [BR:
mlac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP520_02880 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Phi29_Phage_SSB
DUF6364
Motif
Other DBs
NCBI-ProteinID:
ATG97658
UniProt:
A0A291ISF5
LinkDB
All DBs
Position
complement(649380..653147)
Genome browser
AA seq
1255 aa
AA seq
DB search
MQNNKKNKKSIKIELSSPETIRSWSHGEVTKPETINYKTLKAEKDGLFDERIFGPIKNFE
CACGKYKKANPMNKGKVCEKCGVELTESIVRRERMGHIELEEPVTHIWMLKVAPSRIAAI
LDLKTKELEEIVYFVSYVVLEAGNSKYLTPKQVLDLDSAKSSAKTREAMLNTLQEEVLDQ
IEDKESRDARKAKRMIEELKDPSVPFSIEEASDLIAKYTGAKFGIGASAVEYLLQQIDVD
KDMAEIKQELKGSTSASDQQKLMKRLEVLDAFHKSGAKPEWMVLHTIPVIPPDIRPIIQL
DGGRFTTSEINDLYRRIIIRNERLKKVKAMRAPSIIVNNEKRMLQEAVDALMDNDRKSRP
IVGKDKRPLKSLTSTLKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPREMAIT
LFKPFIIEWLQEHDYADNVKAAERMITNNDPKVWDALEQVIKDRPVLLNRAPTLHRLGIQ
AFEPKIVKGKAMRLHPLVTTAFNADFDGDQMAVHLPITPEAVGEARALMLGSHAILGPKD
GKPIVTPTQDMILGNYYVTLEEKGVDGEGMLFANPQEAKTAYDQKVINLNALIAVPVNTL
PGHTFTEDQQDKYLMTTVGKILFNEIFARQFPWINTPDITNAEEAVKEYIIDDSTNPMDW
IEAHDVQQPIKKKELSKIIERYFNTYDSRSTAEMLDNMKDLGYKFSTKSGTTISAGDVVA
YTHKYDEFKEADEKVAQINEFYKEGMLTESEKKQRVIEVWSNVKENIQKELEVILKQDPK
NPVFVMSDSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLTVSEYFISTHGA
RKGMADIALKTADSGYLTRRLVDVSQEVVVVAEDCKPTKGFAVSAIVDTKHQNTIVPLKD
RLVGRRSFEDIEDKDGNIIVKKDEMFTSELADKVTDAGIETVNIRSVLTCDAERGVCEMC
YGIDLATGEEVKYGAPVGVVAAQSIGEPGTQLTMRNFHTGGVAGDADITQGLPRIKELLD
VTTPKGSIAMIAKMNGEVTDVQQHEGFSEIFVKSNSGDVEKYKTSYNAIVRVQPGDKVKP
GDKLTEGSIDIKNLLDVASVEAVQNYILKEVQKVYRLQGIEIADKYIEIIVKQMLGKVKV
TDAGDTDLLPGEVVSQKRFRNAVKWAFENNKQAPLAKPVIFGIKKAPLESESWLSSASFQ
DTARVLAKAIVRGQEDHLEGLKENIMLGNLIPAGTGLTGAKEVMEIGEEYHRNEY
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaataagaaaaataaaaaatcaattaaaattgaattatcaagccctgaaaca
attcgttcttgatctcacggtgaagttaccaagcctgaaactattaactacaaaacatta
aaagctgaaaaagatggactatttgatgagagaatctttggtcctatcaaaaactttgaa
tgtgcttgtggtaaatacaaaaaagcaaaccctatgaacaaaggaaaagtttgtgaaaaa
tgtggggttgaactaactgaatcaatcgtaagacgtgaaagaatgggacacatcgaactt
gaagaaccagtaactcacatttgaatgttaaaagttgctccttcaagaatcgctgctatt
cttgatttaaaaactaaagaattagaagaaattgtttacttcgtttcttatgtagtttta
gaagctgggaactcaaaatacctaactcctaaacaagtattagatttagatagtgctaaa
tctagtgctaaaactagagaagctatgttaaatactttacaagaagaagtattagaccaa
atcgaagacaaagaatcacgtgatgctagaaaagcaaaacgtatgattgaagaattaaaa
gatccttcagttcctttctcaatcgaagaagcttcagatttaattgcaaaatacacaggt
gctaaatttggtattggtgcttctgcagttgaatacttattacaacaaattgatgtcgac
aaagatatggccgaaatcaaacaagaattaaaaggaagtacatcagcttctgatcaacaa
aaattaatgaaaagattagaagttcttgatgcattccacaaatctggtgctaaacctgaa
tgaatggtattacatactattccagttatcccaccagacatccgtccaattattcaatta
gacggaggaagatttacaacttctgaaatcaatgatttataccgtcgtattatcattaga
aacgaacgtttgaaaaaagttaaagcaatgagagcaccatcaatcattgttaacaacgaa
aaacgtatgttacaagaagctgttgatgctttaatggataacgaccgtaaatctcgtcca
attgttggaaaagataaacgtccgttaaaatcattaacttcaactttaaaagggaaacaa
ggacgtttccgtcaaaacttattaggtaaacgtgttgactactcaggacgttcagttatt
gccattggtccagatttaaaaatgtaccaagcaggaattcctcgtgaaatggcaattacc
ttatttaaaccattcattattgaatgattacaagaacacgactatgcagataacgtaaaa
gctgcagaacgtatgattacaaataacgatcctaaagtttgagatgctttagaacaagtt
attaaagatcgtccagttcttttaaaccgtgcacctactttacaccgtttaggaattcaa
gcctttgaacctaaaattgtaaaaggaaaagctatgcgtttacacccattagtaactaca
gcattcaatgccgacttcgatggggaccaaatggctgtccacttaccaattactcctgaa
gcagttggtgaagctcgtgctttaatgttaggttcacacgcaatcttagggccaaaagat
ggtaaaccaatcgttacaccaactcaagatatgattttaggaaactattatgtaacttta
gaagaaaaaggtgttgatggagaaggaatgctatttgcaaaccctcaagaagccaaaact
gcatacgatcaaaaagttattaacttaaatgctttaattgctgttccagttaatacttta
cctggtcacacatttacagaagatcaacaagataaatacttaatgacaactgttggtaaa
atcttatttaatgaaatctttgcacgtcaattcccatgaattaacactccagatatcact
aatgcagaagaagctgtaaaagaatacatcattgatgattcaacaaatccaatggattga
attgaagctcatgatgttcaacaaccaattaagaaaaaagaactttcaaaaattattgaa
agatactttaacacttatgactcacgttcaactgctgaaatgttagataacatgaaagac
ttgggatacaaattctcaactaaatcaggaactacaatttcagctggagacgttgttgct
tatactcataaatatgatgagttcaaagaagctgatgaaaaagtagctcaaattaacgaa
ttctacaaagaaggtatgttaactgaaagtgaaaagaaacaaagagttattgaagtttga
tctaatgttaaagaaaacattcaaaaagaacttgaagttatcttaaaacaagacccaaaa
aacccagtgtttgtgatgtcagactctggagctcgtgggaacgtatctaactttactcaa
cttgtaggtatgcgtggattgatgaacgatactaaaggggatattaaagaaatcccaatt
aaatcatcattccgtgaaggattaacagtttctgaatacttcatctcaactcacggggct
cgtaaaggaatggcagatattgccttaaaaactgcggactcaggatacttaactcgtaga
ttagttgacgtatcacaagaagttgtagtagttgctgaagactgtaaaccaactaaagga
tttgcagtttctgcaatcgttgatacaaaacaccaaaacacaatcgtgcctttaaaagat
agattagttggacgtcgttcattcgaagatatcgaagacaaagatggaaacattattgtt
aaaaaagacgaaatgtttacttcagaattagcagataaagtaactgatgctggaattgaa
acagtaaacattcgttcagtattaacttgtgatgctgaacgcggagtttgtgaaatgtgt
tatggaatcgacttagcaactggagaagaagttaaatacggagctcctgttggggttgtg
gctgctcaatcaattggggaacctggaacacaacttactatgcgtaacttccacaccggt
ggggttgctggggatgctgatattactcaagggcttcctcgtattaaagaattacttgac
gttactactccaaaaggatcaatcgctatgattgctaaaatgaatggagaagttactgat
gttcaacaacacgaaggtttctcagaaatctttgttaaatctaactctggagatgttgaa
aaatacaaaacttcatacaatgccattgttagagttcaaccaggagacaaagttaaacct
ggggacaaattaactgaaggatcaattgatattaaaaacttattagatgttgcctcagtt
gaagctgttcaaaactacattttaaaagaagttcaaaaagtctaccgtttacaagggatt
gaaattgctgataagtacatcgaaatcattgttaaacaaatgttaggtaaagttaaagta
actgatgctggtgatactgatttattaccaggagaagttgtttcacaaaaacgtttcaga
aacgctgttaaatgagcatttgaaaataacaaacaagctcctttagctaaacctgtaatc
tttggtattaaaaaagctcctttagaatcagaatcatgattatcatctgcttcattccaa
gacactgcacgtgtattggcaaaagcaatcgtaagaggtcaagaagatcacttagaagga
ttaaaagaaaacatcatgttaggaaacttaattcctgctggaactggtttaactggtgct
aaagaagttatggaaattggtgaagaataccaccgtaacgaatactag
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