Myxococcus landrumensis: JY572_06715
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Entry
JY572_06715 CDS
T09993
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mlan
Myxococcus landrumensis
Pathway
mlan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JY572_06715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlan03019
]
JY572_06715
03009 Ribosome biogenesis [BR:
mlan03009
]
JY572_06715
Enzymes [BR:
mlan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JY572_06715
Messenger RNA biogenesis [BR:
mlan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JY572_06715
Ribosome biogenesis [BR:
mlan03009
]
Prokaryotic type
rRNA helicases
JY572_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
CMS1
Motif
Other DBs
NCBI-ProteinID:
QSQ15748
LinkDB
All DBs
Position
1827402..1829120
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AA seq
572 aa
AA seq
DB search
MTSAPPSAPPDATFESLGLKPQLVEALTSLGYEEPTPIQHASLPPLLAGKDLLGIAATGT
GKTAAFALPLLHHLVPGKARPHTTSALVLVPTRELAMQVSEAIHRYGQKLGATVLPLYGG
QVIGQQLRVLKRGVDVVVATPGRALDHLRRGTLQLDHVQTVVLDEADEMLDMGFADDLEA
ILSGTPEDRQTALFSATLPPRIASIAERHLRQPVRVRIAKEKVEPGELPRIQQTAFVVPR
AFKIAALGRLLDVESPTAAIIFCRTRTEVDDLTVSLNGRGWRAHALHGGMTQEQRDRVIK
QLKSHGTDLLVATDVAARGLDIPRLSHVVNFDVPNAPEAYVHRIGRTGRAGREGVAITLV
EPREHRLLRNIEKVTGQRIQVATVPTVADLRAKRQELLRATLRELLVAGGQDMYRSLVED
LAGEFEPLDIAAAAVKLLQDAQDEGRAKEEEEIPAVAPPQERKERPGRPSSGPGGRPGGR
PERGGPRRPQQGSWDTTRLWIGAGRQAGIRPADLVGAIAGEAGLDSSRIGAIQITDGFSL
VEVPEPDANRVIAALKAATIRGRKVLIRKDRT
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccgcaccgccgtccgccccccccgacgccacctttgaatccctgggcttgaag
ccccagctcgtggaggcgctcacgtccctcggttacgaggaacccacgcctattcagcac
gcgtccctcccacccctgctcgccgggaaggacctgctgggcatcgccgccactggaacc
ggcaagacggctgccttcgcgcttccgctccttcaccacctcgtcccgggcaaggcacgg
ccgcataccacctccgcgctggtgctggtccccacgcgcgagctggccatgcaggtgtcc
gaggccatccaccgctacggccagaagctgggcgccaccgtcctcccgctctacggcggg
caggtcatcggccagcagcttcgcgtcctcaagcgcggcgtggacgtcgtcgtcgccacg
cccggccgcgcgctggaccacctgcgccggggcacgctccagttggaccacgtgcagacc
gtcgtgctcgacgaggccgacgagatgctggacatgggcttcgccgatgacctggaggcc
atcctctccgggacgcccgaggaccgacagaccgccctcttctccgccaccctgcccccg
cgcatcgcgagcatcgccgagcgccacctgcggcagccggtgcgcgtgcgcatcgccaag
gagaaggtggagcccggtgagctgccgcgcatccagcagaccgcgttcgtcgtgccgcgc
gcgttcaagatcgccgcgctgggccggttgctcgacgtggagtcccccaccgccgccatc
atcttctgccgcacgcgcacggaggtggatgacctcaccgtctccctcaacggccggggc
tggcgcgcccacgcgctccacggcggcatgacgcaggagcagcgagatcgcgtcatcaag
cagctcaagtcccacggcaccgacctgctcgtcgccacggacgtcgccgcgcgaggcctg
gacatcccccggctctcccacgtggtgaacttcgacgtgcccaacgccccggaggcgtac
gtgcaccgcatcggccgcaccggccgcgcgggccgggagggcgtggccatcaccctggtg
gaacctcgcgagcatcggctgctgcgcaacatcgagaaggtgacggggcagcgcatccag
gtcgccaccgtccccaccgtggcggacctccgcgccaagcggcaggagctgctgcgcgcc
accctgcgcgagctgctggtggccggtggccaggacatgtaccggagcctcgtggaggac
ctcgcgggcgagttcgagccgctcgacatcgccgccgcggccgtgaagctgctccaggat
gcccaggacgagggccgcgcgaaggaagaggaagagattcccgccgtcgcgcctccccag
gagcgcaaggagcggccgggccgccccagcagcggtcctggcggcaggccgggaggtcgc
cccgagcgtggcggtcctcgccgtccgcagcagggttcctgggacaccacgcgcctctgg
attggcgcgggccgacaagccggcatccgtcccgcggacctggtgggcgccatcgcggga
gaggccggactggactcgtcccgcatcggcgcgattcagatcaccgatgggttctcgctg
gtggaggtcccggagcccgacgccaaccgcgtcatcgcggcgctgaaggcggcgacgatt
cgcgggcggaaggtcctcatccgcaaggaccggacctga
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