Myxococcus landrumensis: JY572_06815
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Entry
JY572_06815 CDS
T09993
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mlan
Myxococcus landrumensis
Brite
KEGG Orthology (KO) [BR:
mlan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlan03016
]
JY572_06815 (truD)
Enzymes [BR:
mlan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JY572_06815 (truD)
Transfer RNA biogenesis [BR:
mlan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JY572_06815 (truD)
Prokaryotic type
JY572_06815 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QSQ15767
LinkDB
All DBs
Position
1858212..1859807
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AA seq
531 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVSGGRFRVYLMDKQKLSTFDAVTRLRDAFGLRPGAISYCG
LKDKQGRTEQLIAVDGADVDMQEPDLRLKYLGRTNKALSSANITSNRFSVTVRSLGPESL
GPLNVAAAEVNRLGVVNYFDSQRFGSLKHGQGFIAKDLIRGDFEAALHNFLAKPSDLDRS
EDAKVKAFWRDNWGKWDSRVPFEGTKKYHRVLRSLREEPKDFTRAFLQIDADYRAMQLFT
YQSYLWNEGVRRYLQILLPRESLFPMRYQAGTLLFHRDADPETLRVLRDATFPLLAPDSH
FTDPKVEEAVRWVLGREKLQLSDLTIPGAERMLFFKHEERPVLSFPHKLVIGRAQPDELN
RGHIKSNVAFTLPPGAYATLVVKRLFHFEYAEDTPEEIRASQRPKLVELEQAEAAPSSRR
GPPVRESRTSTRDSRAPQREGRAPQREGRAPPRETRGSARDGAERAPASKTSTRATASKA
PAKVALKVEVQVEEKAPAVPLGFREKQRQRKAAREVARAETAAKRPKSRKK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaaacagaagcccgaagacttcagcgtcaaggaatcctaccggttcgatgaa
gtctccggggggcgcttccgcgtctacctcatggacaagcagaagctgtccacgttcgac
gcggtgacccgcctgcgcgacgcctttggcctgcggccgggcgccatcagctactgcggc
ctgaaggacaagcagggccgcaccgagcagctcatcgccgtggacggcgccgacgtggac
atgcaggagcccgacctgcgcctgaagtacctgggccggacgaacaaggccctgtcctcg
gccaacatcacgtccaaccgcttctccgtgacggtccggtccctgggcccggagtccctg
ggccccctcaacgtggccgccgccgaggtcaaccgcctgggcgtggtcaactacttcgac
agccagcgcttcggctcgctcaagcacggccagggcttcatcgccaaggacctcatccgg
ggcgacttcgaggccgcgctgcacaacttcctggccaagccgtcggacctggaccgctcc
gaggacgccaaggtgaaggccttctggcgcgacaactggggcaagtgggactcgcgcgtc
cccttcgagggcaccaagaagtaccaccgcgtcctgcgctcgctgcgcgaggagcccaag
gacttcacccgcgccttcctgcagatcgacgcggactaccgcgccatgcagttgttcacg
taccagagctacctctggaacgagggcgtccggcgctacctccaaatcctcctgccgcgc
gagtcgctgttccccatgcgctatcaggccggcacgctgctgttccaccgcgacgcggac
ccggagacgctgcgcgtgctgcgcgacgccaccttccccctgctcgcgccggacagccac
ttcaccgacccgaaggtggaggaggccgtgcgctgggtgctgggccgcgagaagctccag
ctctccgacctgaccatccccggagcggagcgcatgctcttcttcaagcacgaggagcgg
cccgtcctctccttcccgcacaagctggtcatcggccgcgcgcagcccgacgagctcaac
cggggccacatcaagtccaacgtcgccttcaccctgccgccgggcgcgtacgccaccctg
gtcgtcaagcggctgttccacttcgagtacgccgaggacacccccgaggagattcgcgcc
tcgcagcggcccaagctcgtggagctggagcaggccgaggcggccccgtcgagccgccgc
ggtcccccggtccgcgagagccggaccagcacgcgcgacagccgcgccccccagcgtgaa
ggccgtgcgccccagcgtgaaggccgcgcgcccccgcgcgaaacccgtggcagcgcgcgc
gatggcgccgagcgggctccggcctccaagacctccacccgggccaccgcctccaaggct
cccgccaaggtcgccctcaaggtggaggtgcaggtggaggagaaggcccccgccgtcccg
ctgggattccgtgaaaagcagcgtcagcgcaaggccgcccgcgaggtcgcccgggccgag
acggccgccaagcgcccgaaatcacgaaagaaataa
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