Myxococcus landrumensis: JY572_14875
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Entry
JY572_14875 CDS
T09993
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mlan
Myxococcus landrumensis
Pathway
mlan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JY572_14875 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlan03019
]
JY572_14875 (pnp)
03016 Transfer RNA biogenesis [BR:
mlan03016
]
JY572_14875 (pnp)
Enzymes [BR:
mlan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JY572_14875 (pnp)
Messenger RNA biogenesis [BR:
mlan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JY572_14875 (pnp)
Transfer RNA biogenesis [BR:
mlan03016
]
Prokaryotic type
tRNA degradation factors
JY572_14875 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
OB_PDCD11
S1_TP0910
DUF3500
Motif
Other DBs
NCBI-ProteinID:
QSQ17259
UniProt:
A0ABX7NFU8
LinkDB
All DBs
Position
complement(3968932..3971100)
Genome browser
AA seq
722 aa
AA seq
DB search
MLKKSVKIGESELSIEVGRMAKQADGSVVVRYGDTMLLVTAVSAREKKDVDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSARPLFPEGYAYETQIIASVISADPEN
EGDVHGITGASAALWVSDIPFNGPIAGIRVGRVGGQLVANPTAKQREQSDLDLVMAVSRE
AIVMVEGGAEEVSEADMVAALEFGFKSAQPALDLQDELRRELNKQVRAYDKAPAVDEALR
AKVRDLAMAGIKAGYEIKEKGARYDALSKAKKEAIAKLKEQMAETFTPLTEKHAKQVVED
LKYEHMREMTVNGGRIGGRGHDVVRAITCEVGVLPRTHGSALFTRGETQALVVTTLGTSE
DEQRLEMLGGMTFKRFMLHYNFPPFSVNETKPLRGPGRREIGHGALAERALRNMVPKSDS
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPIKSPVAGIAMGLVKEGDKVAILSD
ILGDEDHLGDMDFKVCGTTKGITSIQMDIKITGLTTEIMSRALEQARQGRIHILGEMLKS
LAQPRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLKEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAQQQGAADTVAAQPAPEATQPNA
KA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaagagcgtcaagattggtgagagcgagctgagcatcgaagtgggccgcatg
gccaagcaggccgacggctccgtggtggtccgctacggcgacaccatgctgctggtgacc
gcggtcagcgcgcgagagaagaaggacgtcgacttcctgccgctgacggtggagtaccag
gagaagctgtactcggccggccgcatccccggcagctacttcaagcgcgagggccgcctc
acggagaaggagacgctggccagccgtctggtggaccgctccgcgcgtccgctgttcccg
gaaggctacgcgtacgagacgcagatcatcgcctccgtcatctccgcggatccggagaac
gagggcgacgtgcacggcatcaccggcgcctccgcggcgctgtgggtgtcggacatcccg
ttcaacggccccatcgccggcatccgcgtgggccgcgtgggcggtcagctggtggccaac
cccaccgcgaagcagcgtgagcagagcgacctggacctggtcatggcggtcagccgcgag
gccatcgtcatggtcgagggcggcgcggaagaggtgtccgaggcggacatggtggccgcg
ctggagttcggcttcaagtccgcgcagcccgcgctggacctgcaggacgagctgcgccgc
gagctgaacaagcaggtgcgcgcgtacgacaaggcgcccgcggtggacgaggcgctgcgc
gccaaggttcgcgacctggccatggcgggcatcaaggccggctatgaaatcaaggagaag
ggcgcccggtatgacgcgctctccaaggcgaagaaggaggccatcgcgaagctcaaggag
cagatggcggagaccttcacgccgctgacggagaagcacgccaagcaggtggtggaagac
ctgaagtacgagcacatgcgcgagatgacggtcaacggtggccgcatcggtgggcgtggg
cacgacgtggtccgcgcgattacgtgtgaagtcggtgttctgccgcgcacgcacggaagc
gcgctgttcacccgtggcgagacgcaggccctggtcgtcaccacgctgggcaccagcgag
gacgagcagcgcctggagatgctgggtggcatgacgttcaagcgcttcatgctgcactac
aacttccccccgttcagcgtgaacgagaccaagccgctgcgtggcccgggccgccgtgaa
atcggccacggcgcgctggcggagcgcgcgctgcgcaacatggtgccgaagagcgactcg
ttcccgtacacggttcgcctcgtgtcggacatcctggagtccaacggctcctcgtccatg
gcctcggtgtgcggtggcacgctggcgctgatggacgcgggtgtccccatcaagtcgccg
gtggcgggtatcgccatgggcctggtgaaggagggcgacaaggtcgccatcctgtcggac
atcctcggtgacgaggaccacctgggcgacatggacttcaaggtgtgcggcaccacgaag
ggcatcacgtccatccagatggacatcaagatcaccggcctcaccacggagatcatgagc
cgcgcgctggagcaggcgcgtcagggccgcatccacatcctgggcgagatgctcaagtcg
ctggcgcagccccgcaaggagatcagccagtacgcgccgcgcatcacgaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggcggcaaggtcatcaaggacatcatc
gcgcgcaccggcgcggcgattaacatcgaggactccggccgggtggacatcgccagcgcg
aacggcgaggccgtgaaggccgccatcgcgatgattcaggcgctgacccgcgaggcggaa
atcgggaagatctacacgggcaccgtgcggaagatcgccgagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctccgagctgtccgacaagcgcgtcaag
agcgtctcggacgtgctgaaggagggcgacgaggtgctggtgaaggtggtcagcatcgac
aagacgggcaagattcgtctgtcgcgcaaggaggcgatggcggagcgcgcggcgcagcag
cagggcgcggcggacaccgtcgcggcgcagccggcccccgaggccacccagcccaacgcc
aaggcctga
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