Myxococcus landrumensis: JY572_26350
Help
Entry
JY572_26350 CDS
T09993
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mlan
Myxococcus landrumensis
Brite
KEGG Orthology (KO) [BR:
mlan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlan03016
]
JY572_26350
Enzymes [BR:
mlan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
JY572_26350
Transfer RNA biogenesis [BR:
mlan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
JY572_26350
Prokaryotic type
tRNA splicing ligases
JY572_26350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6301
Motif
Other DBs
NCBI-ProteinID:
QSQ11895
UniProt:
A0ABX7MZM0
LinkDB
All DBs
Position
6855487..6856839
Genome browser
AA seq
450 aa
AA seq
DB search
MSWKQRLEKAAEGHYVLPKTKSMRVDANLFLSDKLLWGEGPDLPGLEDTVFDQVVNAASF
PGVTRVAVTPDCHVGYGVPIGTVVETDGILLPTAAGYDIGCGMVQLQTTLTAEDVADVVK
RRQWIEQVTRRIAVGVGASRVQHQRKVSDRAFADVVRHGAKALGRGSAVTERDFIPVEDD
RVDIPDRAYEKRGQLGSLGGGNHFTEMQVDEEGRVWVMLHTGSRGFGWNIAKHFFVEGAA
QLGLKSRSEDFVWLDADSPLGRQYWNLHNMAANFAVANRLIIGEAVCAALEDVFGGTASV
YYEISHNLIQKEAGKFVARKGATRAFPAGHPSLKKTNWERTGHPILIPGSMETGSAILFA
EEGASKSIYSVNHGAGRRLSRGEARRVLKQDVTDARMAESGILLNTRHTPLDESGPCYKN
LEDVLETVEMAGLAKVARRLKPVACIKGAD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaaacaacgattggaaaaggccgccgagggccactacgtcctgccgaaaacc
aagagcatgcgggtggacgcgaacctgttcctgtccgacaagctgctctggggtgagggg
cccgacctgccgggcctcgaggacaccgtcttcgaccaggtcgtcaacgccgcgtccttc
ccgggcgtcacccgagtcgccgtcaccccggactgccatgtgggctatggcgtccccatc
ggcaccgtggtggagacggacggcatcctcctgcccaccgccgccggctacgacatcggc
tgcggcatggtgcagttgcagaccaccctcaccgccgaggacgtggcggacgtcgtcaag
cgccgccagtggattgagcaggtgactcgccgcatcgcggtgggcgtgggcgccagccgc
gtgcaacaccagcgcaaggtgtccgaccgggccttcgccgacgtcgtgcggcatggcgcc
aaggccctgggccgaggctccgccgtcaccgagcgcgacttcatccccgtggaggacgac
cgggtggacatccccgaccgcgcctacgagaagcgcggccagttgggcagcctgggcggt
ggcaaccacttcaccgagatgcaggtcgacgaggaaggccgcgtctgggtgatgctccac
accggcagccgaggcttcgggtggaacatcgccaagcacttcttcgtggagggcgccgcg
cagttgggcctcaagagccgcagcgaggacttcgtctggctggacgccgacagcccgctg
ggccgtcagtactggaacctccacaacatggccgccaacttcgccgtggccaaccggctc
atcatcggcgaggccgtgtgcgccgcgctggaggacgtgttcggcggcaccgcgagcgtc
tactacgagatttcccacaacctcatccagaaggaggccgggaagttcgtcgcccgcaag
ggcgccacccgcgcgttccccgccggacacccctcgctcaagaagacgaactgggagcgc
accggccaccccatcctgattcccggctccatggagacgggcagcgccatcctgttcgcg
gaggaaggggcgtccaagtccatctactcggtgaaccacggtgccggccgccgcctgtcg
cggggcgaggctcgccgcgtgctgaagcaggacgtcaccgacgcgcgcatggcggagtcc
ggcatcctcctcaacacccggcacaccccgctcgacgagtccggcccctgctacaagaac
ctggaggacgtgctggagacggtggagatggcggggctggccaaggtggcgcgccgcctc
aagcccgtggcctgtatcaagggcgcggattga
DBGET
integrated database retrieval system
