Macrotis lagotis (bilby): 141488668
Help
Entry
141488668 CDS
T11097
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141488668 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlao03400
]
141488668 (LIG3)
Enzymes [BR:
mlao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
141488668 (LIG3)
DNA repair and recombination proteins [BR:
mlao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
141488668 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141488668
NCBI-ProteinID:
XP_074045027
LinkDB
All DBs
Position
5:complement(232909177..232929932)
Genome browser
AA seq
996 aa
AA seq
DB search
MLVGVASLFQQTFGVLGRRSASHLLHERLLWQLSSPLSTVPGAARLHGSWLFVRKQPLWF
KGDIPGPCTARSAFLPVSCGGFCSSTSEMAEQRYCVDYAKRSTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLQRARASTKKIEDLTELEGWEELQDPEKDQISE
HIAALSSKAVSTPTKKATVQAKLTPTGQVVSPHKGTSPMNTNPRKFSGFTAKPGISKGPS
PNPTPTLSARKCDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIQDFLHKGSGGDGFHGD
VYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSQDDMVRDLEQGDVSETVRVFFEQSQ
SFPPAAKSLLTIQEVDEFLLKLSKLTKEDDQQNVLQDIASRCTANDLKCIIRLIKHDLKM
NSGAKHVLDALDPNAYEAFKASRNLQDVVERVLANQQESEKAPGMKRTLSVQAALMTPVQ
PMLAEACKSIDYAMKKCPNGMFSEIKYDGERVQVHKKGDQFSYFSRSLKPVLPHKVAHFK
DYIPQAFPGGQSMILDAEVLLIDTKTSRPLPFGTLGVHKKAAFQDANVCLFVFDCIYFND
ISLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTRASDLADMINRVIREGLEGLVLKDV
KGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDPSSQK
WCTVTKCSGGHDDATLARLQDELDMVKISKDPNKIPSWLKINKNYYPDFIVPDPKKAPVW
EITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTVVA
ADEGSSVTSSSSGENDGTSQRASKVSPSKTPAQARKVKRKANSPPSKADNKPAMRPSPGK
VEKKALKRKAPEEDTNQKKTLLDIFTGVRLYLPPSTQDFSQLRRYFVAFDGDLVQEFDTA
SATHMVGSGDKNPGAQQVSPEWIWACIRKRRLVAPC
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgggtgtggccagcctcttccagcagactttcggagttcttggccgaagatcg
gcatcacatctgctccacgaacggttactctggcagctgagtagcccactctctactgta
ccaggagctgctcgcctccatgggtcctggctctttgtgaggaagcaacctctctggttc
aagggggatatcccaggaccatgcactgcccgctctgccttcctgccagtgtcctgtggg
gggttctgcagcagcacttctgagatggctgaacagcgatattgtgtggactatgccaag
cgcagcacagctggctgcaagaaatgcaaggaaaagatagtgaagggtgtgtgccggata
ggcaaagtggtacccaaccccttctcggagtctgggggtgacatgaaggaatggtaccac
attaagtgcatgtttgagaagctgcagcgggcccgggcttccaccaagaaaattgaggac
ctgaccgaactggagggctgggaagaattgcaggacccagagaaggatcagatcagtgag
cacatcgcagccctctcctccaaggcagtgagcacacccacaaagaaagccactgtccag
gccaagctgacgcccaccggccaggtggtttccccgcacaaaggaacctcaccgatgaac
accaacccccggaagttctctggtttcacagccaagccaggcatctccaagggaccctcc
cccaatcccacgcccaccctgtcagccaggaagtgtgatccaaagcacaaggactgtttg
ttgcgggaattccggaagctgtgtgctatggtggctgacaagcccagctacaacgtgaag
acccagatcatccaggacttcctgcacaaaggatcaggcggggatggtttccatggcgat
gtgtacctgacagtgaagctcctcctgccaggtgtgatcaagagtgtttacaacctgaat
gacaaacagattgtgaaacttttcagtcggatttttaactgcagtcaggatgacatggtc
cgggacttagagcagggagatgtgtcagagacagtacgggtgttcttcgagcaaagccag
tccttccccccggcagccaagagccttctcaccatacaagaagtagatgagttccttcta
aaattgtccaagctcacaaaagaagacgatcagcaaaatgtgctccaggacattgcctcc
aggtgtactgccaacgacctgaagtgtatcatcagactcatcaagcacgacctcaagatg
aattcaggcgctaagcacgtgctggacgccctggatcctaatgcctatgaagctttcaag
gcctcgcggaacctccaagatgtggtggagcgcgtcctggcaaatcagcaagagtctgag
aaggccccaggcatgaagcggacgctcagcgtccaggcagctctcatgacccctgtgcag
cccatgctggccgaggcctgcaaatccattgattatgcaatgaagaagtgccccaacggg
atgttctctgagatcaagtatgacggggagcgggtgcaggtgcataagaagggggatcag
ttcagctatttcagccgaagcctcaagcctgtcctgcctcacaaagtggcccattttaag
gactacatccctcaggccttcccagggggccagagcatgatcctggatgccgaggttctt
ctgatcgacaccaaaacgagcagacctttgccctttgggactttgggggttcataagaaa
gccgctttccaagatgccaatgtgtgcttatttgtgtttgactgcatctatttcaacgac
atcagcctgatggacaggccattgtgtgaacggcggaagtttctccacgacaacatggtt
gaaatccccaatcggatcctcttctccgaaatgaagcatgtcacgagagcttcagacctg
gctgatatgatcaaccgagtgatccgggaagggctggaaggactggtgctaaaagatgtg
aagggcacctatgagccggggaagcggcactggctaaaagtgaagaaggactacctgaat
gagggggccatggctgacacagcagatctggtggtcctgggggccttctatgggcaaggg
aacaaaggtggcatgatgtccattttcctgatgggctgctatgaccccagcagccagaag
tggtgcacagtcaccaagtgttccgggggccatgacgacgccacccttgctcgcctgcaa
gacgagctggacatggtgaagatcagcaaggatcccaataagattcctagctggctgaaa
atcaacaagaactactacccggatttcattgtcccagatccaaagaaagctccagtctgg
gagatcacgggggcagaattctccaaggcggaggcccatacagctgatggcatctccatc
cgtttcccccgctgtacccgaattcgagatgataaagattggaagtctgccaccaacctc
ccacagcttaaggagctgtaccagctttccaaggaaaaggctgacttcacagtggtggcc
gcagatgaggggagctctgtgacaagcagcagcagtggagagaatgatggcacctctcaa
agagcctccaaagtatcccccagtaagacccctgcccaagccagaaaggtcaagagaaag
gcgaatagccccccgagtaaagcagacaacaaaccagccatgagaccttcccctgggaaa
gtggaaaagaaagcgttaaaaaggaaggcacctgaggaagacacaaaccaaaagaagacg
ctgctggacatcttcacgggtgtgcggctctacctgccaccctccacgcaggatttcagc
cagctgcgccgctactttgtggcatttgatggggatctggtccaagagtttgacacggcc
tcagctacgcatatggtgggcagtggggacaagaaccccggggcccagcaggtttcccct
gaatggatctgggcatgtatccgaaagaggagattggtggcaccgtgctag
DBGET
integrated database retrieval system
