Macrotis lagotis (bilby): 141489709
Help
Entry
141489709 CDS
T11097
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao04151
PI3K-Akt signaling pathway
mlao04510
Focal adhesion
mlao04512
ECM-receptor interaction
mlao04820
Cytoskeleton in muscle cells
mlao04974
Protein digestion and absorption
mlao05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
141489709 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141489709 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141489709 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141489709 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
141489709 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
141489709 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mlao00535
]
141489709 (COL9A1)
Proteoglycans [BR:
mlao00535
]
Extracellular matrix (ECM) proteoglycans
Others
141489709 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
141489709
NCBI-ProteinID:
XP_074046290
LinkDB
All DBs
Position
5:complement(56250147..56372267)
Genome browser
AA seq
801 aa
AA seq
DB search
MTGNTLKKNWSIWQIQNSLGKEQVGMKINGQTQSLAFSYKGMDGSLQTAAFSNTPILFDS
QWHKVMIGVERRSVTLFIDCKRIESLPIKTRGKIDVDGFAVLGKLTDNPQVSVPFELQWL
LIHCDPLRPRRETCHELPVRPSLSNGERGPPGPQGPPGPPGPPGVPGIDGIDGDRGPKGS
PGPQGPNGEPGKPGAPGLPGTPGADGLTGPDGSPGPVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGASGLPGELGRVGPSGDPGRRGPPGPPGPPGPSGTIGLHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAK
GDKGARGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGIQGPRGINGLPGPKGENGLP
GVDGRDGIPGMPGSKGEPGKPGPPGDIGRQGLPGLPGTPGAKGVAGEKGNTGAPGVPGVM
GNSGKPGQQGPQGEVGPRGPRGLPGSRGELGPSGAPGSPGKLGPLGSPGLPGLPGPPGLP
GLKGDRGSVGEPGPKGEQGRAGEEGEAGGKGELGDIGLPGPKGSVGSPGEPGLRGPEGSR
GLPGVEGSRGPPGPRGMQGERGATGLPGIEGPAGRAPTDQHIKQVCIRVMQENLALMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQVGPRGLPGLKGPPGELGLRGPKGDLGER
GERGPPGRGPKGLPGSIGLPGDPGPASYGKEGRDGERGPPGPAGIPGVPGPPGPAGPPGF
CEPASCTVQAGQRAFSKGPDQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaacactctgaaaaagaactggagcatctggcagatacaaaattccttgggg
aaagagcaagttggcatgaagattaatggccaaactcaatcccttgccttttcctataaa
ggcatggatggcagcctccaaactgcagctttttcaaatactcctattttgtttgattcc
cagtggcataaagttatgattggtgtggaaaggagaagtgtcactctctttattgactgc
aaaaggattgaatccttacccataaagacaaggggcaagattgatgtggatggttttgct
gttctaggaaagctcacggataatcctcaggtttctgttccgtttgaactccagtggctg
ctgattcattgtgaccctctgagaccaagaagagaaacttgccatgaacttccagttcgg
ccaagcctgagcaatggggagagaggtcccccgggtccccaagggcctcctggtcctcct
gggcccccaggcgttccgggcatcgatggcatcgacggagatcgaggtccaaagggttcc
ccaggcccccagggtcccaatggagagccagggaaaccaggagctccgggcttaccgggc
acaccaggcgcagatggtttgacaggacctgatggatcacctggcccagttggtccaaga
ggacaaaaaggagaacctggggtcccaggatcacgtggatttccaggtcgtggcattcct
ggaccaccaggacctcctggtgcatcaggacttcctggagagcttggtcgcgtgggacca
tctggtgaccctgggagaagaggaccacctggcccaccaggtcctccaggacctagtgga
acaattggactgcatgatggagatccactgtgtcctaattcctgtccaccaggtcgctca
ggatatcctggtctaccaggcatgaggggtcacaaaggggcaaaaggagaaattggagaa
ccaggaagacaaggtcataagggagaagagggtgaccagggagaacttggagaagtggga
gctcaaggacctccgggtcctcaaggcttgagaggaatcaccggtatagttggggccaaa
ggagacaaaggagctcgtggccttgatggtgagcctgggcctcagggtcttcctggtgca
cctggtgatcaagggcaaagaggaccacttggagaaacaggtcccaagggcgacagaggc
attcagggtcctagaggaataaatggcctcccaggtcccaaaggagagaatggcttgcca
ggggtagatggtcgagatggaattcctggaatgcctggatcaaagggtgaacctgggaaa
cctggtcctcctggtgatataggaaggcagggacttcctggtttgcctggaactcctggt
gcaaaaggtgttgctggtgaaaagggaaatacaggtgctcctggggtacccggtgttatg
ggaaattcaggaaaaccgggtcaacagggacctcaaggggaagttggaccaagaggaccc
cgggggctaccaggtagcagaggagaattaggacctagtggtgctccaggatcaccaggt
aaattgggtcctcttggcagcccaggccttccaggtttgcctggtccccctggactccct
ggactgaaaggcgacaggggttcagttggtgagcctggtccaaaaggagagcaaggtcgt
gctggtgaagaaggtgaagcaggaggaaaaggagaattaggagatataggattgccaggc
ccaaagggatctgtgggtagccctggagaacctggtttaagaggacctgaaggatcacgt
gggttgcctggagtagaaggatccagagggccccctggaccacgaggcatgcaaggtgaa
agaggagcaacaggtcttcctggcatcgagggtccagcgggtagagcaccaacggatcag
catattaagcaggtctgcataagagttatgcaagagaatttagccctaatggctgctagt
ctgaagagacctgactcaggtgcttctggactgcctggaagacctggaccaccaggtcca
cctgggcccccaggagagaatggttttccaggtcaggtgggacctcgtggtctcccaggt
cttaaaggtcctcctggggagcttggtttgagaggccctaaaggtgacttgggtgaaagg
ggtgagagaggacctcctggaagaggacccaaaggcttgccaggatcaattggtctccca
ggtgatccaggtccagcaagctatggaaaagaaggacgggatggagaaaggggccctccg
ggtcctgcaggaattccaggggttcctggccctcctggccctgctggtcctcctggcttc
tgtgagccagcctcctgtacggtacaggctgggcagcgggcattcagcaaagggcccgat
cagtga
DBGET
integrated database retrieval system
