Macrotis lagotis (bilby): 141490872
Help
Entry
141490872 CDS
T11097
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao04151
PI3K-Akt signaling pathway
mlao04382
Cornified envelope formation
mlao04510
Focal adhesion
mlao04512
ECM-receptor interaction
mlao04518
Integrin signaling
mlao04820
Cytoskeleton in muscle cells
mlao04926
Relaxin signaling pathway
mlao04933
AGE-RAGE signaling pathway in diabetic complications
mlao04974
Protein digestion and absorption
mlao05146
Amoebiasis
mlao05165
Human papillomavirus infection
mlao05200
Pathways in cancer
mlao05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
141490872 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141490872 (COL4A4)
04518 Integrin signaling
141490872 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141490872 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141490872 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
141490872 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
141490872 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
141490872 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
141490872 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
141490872 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
141490872 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
141490872 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
141490872 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlao04147
]
141490872 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
mlao00536
]
141490872 (COL4A4)
Exosome [BR:
mlao04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141490872 (COL4A4)
Glycosaminoglycan binding proteins [BR:
mlao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141490872 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
141490872
NCBI-ProteinID:
XP_074047345
LinkDB
All DBs
Position
6:58612878..58763059
Genome browser
AA seq
1693 aa
AA seq
DB search
MGNNWLRMALMKCPCRWLQQFVMGAWSLVIILFSIQQVYGGGKKYSGPCGGRDCSICQCF
PEKGSRGQPGPLGPQGPIGDLGPPGPIGLPGEKGMKGDSGLPGPVGDKGDKGPTGVPGFP
GLDGIPGYPGPPGSRGKPGIDGCNGSRGDPGFQGERGVPGPEGPAGLPGPEGEKGNSVYI
SDAIKGLPGDRGDPGPPGLPGPRGANGSVGEIGFPGIPGSRGPPGRPGRPGDQGNPGVGV
KGQVGDPGEVGLRGAPGPTLLVGPPGSCLVKGEKGIKGMPGIIGPPGPYGAKGEPGIGMK
GEKGISGFPGPRGGPGSHGLPGFPGVKGEPGAIGVRGQFGVSGTKGDPGERGKPGPPGVL
VTPPVSCKGPPGDPGFPGPYGEKGSMGLPGPSGPSGRPGEDRMGITGPPGPPGLPGLQGL
QGEAGIPARGDSPTGKPGTPGHPGIPGIPGQPGQPGSDVMHCNIGPPGPQGMKGQSGPPG
RKGTKGEKGNEGLCSCCPGPMGLPGTPGPHGLQGRKGEMGLPGRVGEKGDPGFPGPQGSP
GPPGIPGTPGLTGAKGEKGDMVIARIKGRKGEKGHDGLPGYPGQGGVPGQNGLDGERGEA
GLPGSRGGAIPGAEGSPGTPGSPGKMGAMGPPGLGFPGPEGVRGGPGSPGHPGMRGATGS
KGQKGDTYPCPSPYPGSPGAPGVPGAPGPKGFPGPPGEAGLPGFDGQKGQQGKPGISEIP
GPPGFRGDPGEPGPEGEKGLAPIGPPGPPGLPGINGPKGMPGDSVYGLPGLPGNVGPPGL
PGLKGLRGKPGFPGSRGTTGVPGFPGIKGLTGREGNVGPPGKPGPPGHGCQGFPGLPGQP
GLPGSPGIPGLDGLKGHQGDRGPPGPAGMKGLPGSPGLPGLPGPPGPQGDPGHYGVNGSP
GSQGPKGAQGLPGIPGFPGERGREGQPGLPGRKGDPGEEGYCGLPGEPGEPGLKGEKGYP
GDQGDSSIIPRKGEKGEPGPPGGYGFPGEKGDKGMPGIPGMKGFPGRDGLPGFQKGEPGK
DGHPGLPGPPGLPGPQGPRGIIGFPGIPGDQGELGFPGLPGLPGPHGERGPKGNQGDAAS
LFGPPGPKGDPGIPGCPGYFGEQGDPGFPGPPGSSGPPGREGSPGSPGLPGFPGPPGIPG
LKGYPGEAGDPGPPGVRGDPGPPGPKGMKGSSGLPGLNGLPGLKGQKGSKGSSGSHEVGP
PGQMGLPGPKGKKGEPGRPGASCPGLAGDRGPLGPPGRPGLPGLPGPMGKTPEDGILPPG
PQGDKGPPGPDGPTGSPGPPGPPCHIDHLKGDPGDHGQPGPPGPPGAPGPPGTKGFPGCK
GKDGQKGPMGSPGPIGPPGFPGPPGDKGLQGPPGKPGPPGPPGCQGEPGPPADTSSCPKI
PGLPGVPGPRGPEGKMGSPGQQGPPGSPGPKGECGVDGQRGLDGEPGPPGPPGHKGDPGE
KGCRGPPGPPGPIGDPGPKGSGTRFLNGFLLVLHSQTDKEPSCPEGMPKLWTGYSLLYME
GQEKAHNQDLGLAGSCLPMFSTMPFAYCNINQVCHYARRNDKSYWLSSAAPLPMMPVSEE
EIQAFISRCTVCEAPAQAMAVHSQGQAIPPCPPTWRSLWIGYSFLMHTGAGDQGGGQSLT
SPGSCLEDFRAAPFIECQGRQGTCHFFANEYSFWLTTVPPDLLLSLSPLPDTLKQGQAQR
QRISRCQVCMKYS
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataattggttgcgaatggcattaatgaagtgtccttgcagatggcttcagcaa
tttgtaatgggtgcttggtcacttgtaattattctcttttctatacaacaagtttatggg
ggtggaaagaagtactctggaccttgtggaggacgagattgttcaatctgtcagtgtttt
cctgaaaaaggatctaggggccaacctggacctttaggaccccaaggccctattggagat
ttaggacctccgggacccattggattgccaggagagaaaggaatgaaaggtgacagtgga
cttcctggaccagtaggagataaaggagataaggggccaacaggagtgcctggtttccca
ggtttggatggcatacctggctatcctggacctccagggtcaagaggcaaacctgggatt
gatggctgcaatggttcaagaggagatccagggtttcaaggagagagaggagtgccagga
ccagaaggtccagctggtcttccaggaccagaaggagaaaaaggaaattcagtgtatatt
tcagatgctattaaaggcctcccgggagatcggggtgatccaggacctccgggcttacct
ggaccccgaggggcaaatggatcagtgggtgaaatcggatttccagggataccaggttct
agaggacctccaggtcgccctgggagaccaggtgatcagggtaatccaggtgttggagtc
aaaggccaagttggagatccgggtgaagttggtcttcgaggggctccaggaccaacctta
ctggtggggcctcctggttcatgtcttgttaaaggagaaaaaggcataaaaggaatgcct
ggaataattggtccccctggaccatatggagccaagggtgagcctggtattgggatgaag
ggtgaaaagggtatttctggattcccaggacctcggggtggccctggttcccatggactt
ccaggttttccaggagtaaagggagaacctggagcaattggtgtccgtgggcaatttgga
gtttctggcactaagggagatcctggagagcgtgggaagccaggaccaccaggtgttttg
gtaactccacctgtttcatgcaaaggacctccaggggacccaggattcccaggaccttat
ggagaaaaggggtcaatgggtctgcctggtccatcgggaccctctggcagaccaggggaa
gacagaatgggaataacaggaccccctgggcctccggggctgccaggtcttcaaggcctt
caaggtgaagctggaattcctgcaagaggtgattctcctacaggaaaaccagggactcca
ggacacccaggaataccaggaatcccggggcagccaggtcaacctggatcagatgtcatg
cattgtaacattggccctcctggaccacagggaatgaaaggtcagtcaggacccccagga
agaaaaggcacaaaaggagaaaaaggaaatgaagggctgtgttcatgttgcccaggtccc
atgggccttccaggtactccagggccacatggtcttcagggtaggaaaggagaaatgggt
ctacctggaagagtaggagaaaaaggtgacccaggttttcctggtcctcaaggatcccca
ggacctccaggaatacctggtaccccgggcctaactggtgctaaaggagaaaagggtgat
atggttatagcaagaatcaaaggaagaaaaggagaaaaaggacatgatgggcttcctggc
tatccagggcaaggaggggttcctggtcagaatggactggatggagaaagaggagaagca
ggtcttccaggcagtcgtggcggagcaattccaggtgcggaaggatctcctggaacacca
ggatctcctgggaagatgggagcaatgggacctccaggacttggatttcctggcccagaa
ggggtgagaggtggaccaggaagccctggccatcctggtatgagaggagcaacaggttcc
aagggccagaaaggtgacacctatccttgtccttccccctatccagggagccctggagct
ccaggtgttccaggtgctccaggtcctaagggatttccaggccccccaggtgaagctggg
ctacctgggtttgatgggcagaaaggccaacaaggcaaaccaggaatatcagaaatacca
ggaccacctggttttcgaggtgaccctggagaaccaggtcctgaaggtgaaaaaggattg
gcccctattggtcctccaggtcctccaggattaccaggaatcaatgggccaaaaggaatg
ccaggcgattcagtttatggcctgccagggcttccaggaaatgtaggccctccaggattg
cctgggcttaaaggactcagaggcaagccaggatttcctggatctagagggacaactggt
gttccaggattcccaggcatcaaaggacttacaggcagagaaggaaatgttgggcctccc
ggtaaaccaggtccaccaggccatggatgccaaggctttccagggttgccagggcaacct
ggactccctgggtcaccaggtattccagggcttgatggcttgaaaggtcaccaaggagat
cgaggtcctcctggaccagctggaatgaaaggtctcccaggatccccaggactaccaggt
ttacctggacctccaggaccacaaggggatccaggccactatggagttaatggttcacca
ggttcccaaggcccaaaaggggcccaaggtctgccaggtatcccaggttttccaggagag
agaggaagggaagggcagccaggacttccaggaagaaagggtgaccctggagaagagggt
tattgtggccttccaggagaaccaggagagccgggtttgaaaggagaaaaagggtatcca
ggagatcaaggggacagttccataattcccagaaaaggggaaaaaggggaacctgggcca
cctggtggatatggattcccaggagaaaaaggagataaagggatgcctggcatcccaggg
atgaaaggatttccaggaagggatggtctacctggatttcaaaaaggagaacctggcaaa
gatggccatccaggacttccaggacctccaggtctcccaggacctcaaggacccagagga
ataattggttttccaggtattccaggagatcagggtgagctgggctttccaggcttgcct
ggacttccaggacctcatggggaaagaggacctaaaggaaatcaaggtgatgcagcaagt
ctgtttggaccacctggaccaaagggagatccaggtatccctggatgtccaggatatttt
ggcgagcaaggagatccaggttttccaggccctccagggtctagtggaccaccaggaagg
gaaggatcccctggatccccaggactaccaggatttccaggtcctccagggattcctggg
ttgaaaggctatccaggcgaagcaggtgacccagggcccccaggggtcagaggagatcca
ggaccaccaggacccaagggaatgaaaggttcctcaggacttccaggattgaatggcttg
cctggactcaagggtcagaaaggatcaaagggtagttcaggctcacatgaagtaggtcca
ccaggccaaatgggactgcccggaccaaaagggaagaaaggggaacctggcagacctgga
gcttcttgtccaggtcttgctggagacaggggtcccctaggtcctccagggagaccagga
ttgcctggactacctggtcctatgggaaaaactccagaagatggaattcttccccctggt
cctcagggagataaaggtccccctggccccgatggaccaacaggttcacctggaccacca
ggtcctccatgccatattgatcacctgaaaggagatccaggtgaccatggtcaaccaggt
ccacctggaccaccaggtgcaccaggacctccaggaaccaaaggctttccaggatgtaaa
ggaaaagatggccagaaaggaccaatggggagccctggacctataggcccacctggattt
cctgggccacctggagataaaggtttgcaaggacctcctgggaaacctggcccccctggt
cctccaggttgccaaggtgaacctggtccaccagcagatacttcttcctgccccaaaatc
ccaggactcccaggagttcccggcccaagaggaccagaagggaagatggggtccccaggg
caacaaggtcctccaggctcaccaggacccaaaggcgagtgtggtgtggatggccaaaga
ggattggatggtgaacctggacctccaggaccccctggacataaaggagatccaggagaa
aaaggctgtagaggtccaccaggtccccctggcccgattggggatccaggacccaaaggt
tctggaactagattccttaatggattcctactggttctccatagtcagacagacaaagaa
ccctcttgtcctgaaggaatgcccaaactgtggactggatatagtctgttgtatatggaa
ggacaggaaaaagcacataaccaagatttaggtcttgctggatcctgccttccaatgttc
agcaccatgccatttgcctattgcaacattaaccaagtctgccattatgccagaaggaat
gacaaatcctattggctatcaagtgctgctcctctacccatgatgcccgtctctgaagag
gagatacaagccttcatcagccgatgcacagtgtgtgaggccccggctcaggctatggct
gtgcacagccaaggtcaagcaatccctccgtgcccacccacctggaggagcctttggata
gggtattcattcctaatgcacacaggggctggggatcagggaggaggccagtccctcaca
tcacctggaagctgccttgaagatttcagagcagcgccattcatcgagtgccaaggacgg
caggggacttgtcattttttcgctaatgaatacagcttctggctaaccacggtgccacca
gacttgctgctctccttgtctcctttgccagacaccttaaaacaaggacaggcacaacgc
caaagaatcagcagatgccaggtctgcatgaagtatagctaa
DBGET
integrated database retrieval system
