Macrotis lagotis (bilby): 141491269
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Entry
141491269 CDS
T11097
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao04151
PI3K-Akt signaling pathway
mlao04382
Cornified envelope formation
mlao04510
Focal adhesion
mlao04512
ECM-receptor interaction
mlao04518
Integrin signaling
mlao04820
Cytoskeleton in muscle cells
mlao04926
Relaxin signaling pathway
mlao04933
AGE-RAGE signaling pathway in diabetic complications
mlao04974
Protein digestion and absorption
mlao05146
Amoebiasis
mlao05165
Human papillomavirus infection
mlao05200
Pathways in cancer
mlao05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
141491269 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141491269 (COL4A1)
04518 Integrin signaling
141491269 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141491269 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141491269 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
141491269 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
141491269 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
141491269 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
141491269 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
141491269 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
141491269 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
141491269 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
141491269 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlao04147
]
141491269 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mlao00536
]
141491269 (COL4A1)
Exosome [BR:
mlao04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141491269 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mlao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141491269 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
141491269
NCBI-ProteinID:
XP_074048127
LinkDB
All DBs
Position
6:complement(180620426..180868435)
Genome browser
AA seq
1670 aa
AA seq
DB search
MSPRPLVWLLLLLLAALLLNEERSKAAAKGCSGSGCGGKCDCQGVKGQKGERGLPGLQGV
IGFPGMQGPEGPHGPPGNKGDAGEPGLPGTKGTRGPPGSSGYPGNPGLPGIPGQDGPPGP
PGIPGCNGTKGDRGPVGPPGLPGFSGLAGPPGLPGMKGDPGEILSLIPGMPLKGERGFPG
PTGPIGPRGSPGLPGMDGPPGYMGPPGPPGPPGFPGEKGQMGLSFQGPKGDKGEQGVGGP
PGEPGQAQIGKKGDFATQGEKGQKGEPGQPGIPGEGQKGEPGKPGPRGKSGKDGEKGEKG
SPGFTGEPGVPGLPGRDGAKGDKGQAGPPGPPGSVIGTQPGGEKGDRGYPGAPGLKGEPG
PKGYPGIQGPPGPPGFPEPGTIGAPGFPGERGEKGDPGPPGQSLPGTSGREGAQGPPGLP
GPPGLPGHTNGRVECQPGPPGDQGLPGRTGLPGLTGEMGEKGDKGQGCLTCDIDGVPGLP
GPQGPPGEIGFPGQPGAKGDRGFPGHNGLEGMPGPPGLPGLRGEPGAKGEPGEIYVDAQL
KGDKGEPGFPGQPGSPGRAGTPGRDGHPGLQGPKGSPGSVGAKGDRGPPGGVGFPGSRGD
IGPPGPPGFGLPGPIGDKGQAGFPGSPGSPGLTGPKGEAGKVVPLPGPPGAEGAPGAPGF
PGPQGDRGFPGSPGRQGPPGEKGAVGQPGIGFPGPPGPKGVDGLPGAIGQPGNPGRPGFD
GLPGNPGVPGQKGEPGVGLPGPKGSAGLPGIPGLPGEKGNIGEPGIPGEHGHVGPPGLQG
VRGDPGLQGIQGPKGAPGAPGIGPPGVMGPPGGQGPPGLAGPPGIKGEKGYPGFPGSDMP
GPKGDKGSSGLPGLTGQIGLPGPPGIQGTPGLPGFPGSKGEMGVMGTPGQPGPPGPVGSP
GFQGIKGDQGFPGTTGPRGDPGFKGDKGDAGLPGQPGSMDKVDMDSMKGQKGDQGEKGQI
GPIGDKGARGDPGTPGVPGKDGQAGTPGHPGPKGDPGLGGSPGSPGLPGPKGSAGEIGKP
GLPGEKGVQGIPGSQGIPGFPGLKGEKGVKGEAGRPGIGTPGLPGEKGDPGPSGFPGRPG
EKGEKGSPGIPGMPGPPGPGGSPGDIGYPGSPGIPGDKGDKGLPGLDGVPGVKGDAGQPG
LPGPSGPVGPKGEPGGDGIPGSSGEKGEPGLPGRGLPGFPGSKGEKGSKGELGFPGLAGS
PGIPGLKGEPGFMGPPGPPGQQGIPGLPGRAVEGPKGDRGPQGQPGIPGVPGPMGPPGLP
GLDGAKGEKGNPGWPGSPGAPGVKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGTK
GSPGIQGLKGDQGDQGLPGSKGAPGPPGPPGPYTLIKGEAGVPGPEGPAGLKGLPGLPGP
KGQQGVTGSMGVPGAPGEPGFDGAPGQKGEPGPFGPPGPKGLPGPPGPDGLPGSMGPPGT
PSVDHGFLVTRHSQTTDDPQCPPGTKIIYNGYSLLYVQGNERAHGQDLGTAGSCLRKFST
MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIFGENIRSFISRCAVCEAPAMVMA
VHSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR
GTCNYYANAYSFWLATIERNEMFKRPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagtccacggccgcttgtttggctgctgctgctgctgctggctgccctcctgctcaac
gaggagcggagcaaagcagctgcaaagggttgttctggatctggctgtggtggaaaatgt
gattgccaaggagtgaaaggtcaaaagggtgaacgaggtcttccaggactacaaggtgtc
attggatttcctggaatgcaagggcctgaaggtccacatggacctccgggcaataagggg
gatgctggagaaccaggactaccaggaacaaaaggaacaagagggccaccaggctcatct
ggttatcctggaaaccctggacttcctggtatcccaggccaagatggtccacctggtcct
cctggtatcccaggatgtaatggtacaaaaggtgatagaggtccagtgggtcctcctgga
ttgcctggattttctgggctagcaggtccccctggattaccaggaatgaagggagaccca
ggtgaaatacttagtctaattccaggcatgccattaaaaggtgaaaggggatttccagga
cccactggaccaataggtccaagaggaagtccagggttaccaggcatggatggtccacca
ggctatatgggaccacctggtccaccaggtcctccaggatttccaggagaaaagggtcaa
atgggtttgagttttcaaggacccaaaggtgacaagggtgagcaaggtgttggaggccct
ccaggtgaaccaggacaagctcaaataggaaaaaagggagattttgctactcaaggagag
aagggtcaaaaaggagaacctggacaacctggaatacctggtgaaggacagaaaggtgaa
cctggtaaaccagggcctcgaggtaaatctggaaaggatggtgaaaaaggagaaaagggg
agtccaggttttacaggtgagccgggagtcccaggactaccaggtcgagatggtgctaag
ggagacaaaggacaagcaggacctccaggcccaccaggctctgtgataggcactcaacca
gggggtgaaaaaggagacagaggatatccaggtgctccaggattaaaaggcgaaccgggt
ccaaaaggttacccaggtattcaaggtccaccaggtcctccaggtttcccagaaccaggg
acaattggcgctcctggctttcctggtgaaagaggagaaaagggtgacccaggtcctcca
ggacaatcattgcctgggacaagtggaagagaaggagcccaaggacctcctgggcttcct
ggacctcctggtttaccgggccatacaaatggaagagtggaatgccagcctggaccacct
ggtgatcaaggtctgcctggaagaactggtctaccaggattgacgggagagatgggagag
aaaggtgataaaggtcaaggttgcctaacttgtgatatagatggagtacctggacttcca
ggtccacaaggaccaccaggggaaataggttttccaggacagccaggtgctaagggagac
agaggattccctggacataatggtcttgaagggatgcctgggcctccaggcttgccagga
ctgaggggtgaaccaggagcaaagggagagcctggagagatttatgttgatgcacaactc
aaaggtgacaagggagagccaggttttcctggacagccaggttctccaggaagggcagga
acacctggaagagatggccatcctgggcttcagggtcccaaaggctccccgggttcagta
ggagcaaaaggagaccgtggtccacctggaggagttggatttcctgggagtcgtggtgac
attggtccccctggcccaccaggatttggtctacctggtccaattggtgacaaagggcaa
gcaggttttccaggaagccctgggtcaccaggcctcacaggtcctaagggtgaagcagga
aaggttgttcctctacctggtcccccaggggcagaaggagctccaggagccccaggtttc
ccaggacctcaaggtgacagaggttttcctggcagcccaggaagacaaggacctccagga
gaaaaaggtgctgttggtcaaccaggaatagggtttccaggacctccggggccaaaaggt
gttgatggcttacctggagctataggtcagcctggaaatccaggtcgtccaggatttgat
ggtttaccaggaaatccaggtgttccaggtcaaaagggtgagccgggagtgggtctacca
ggacctaaaggatcagcaggtcttccagggattccaggccttcctggtgaaaaggggaac
attggtgaaccaggcattccaggagaacatggacatgtagggccacctgggcttcaagga
gtcagaggggacccagggctccaaggaatccaaggccccaaaggtgcacctggtgctcca
ggaataggccctcccggagttatgggacctcctggagggcaggggccaccaggattggca
ggtcctcctggaatcaaaggagaaaagggttaccctggattcccaggatcagatatgcca
ggacctaaaggagataagggaagttcaggtcttcctggcttaacaggccaaataggttta
cctgggcctcctggcatacaagggactcctggacttcctggttttccaggtagcaaggga
gaaatgggagtaatgggaacccctggtcagccaggccctcctggaccagtgggttctcca
ggattccaagggataaaaggtgaccaaggtttcccaggtacaacaggacccaggggtgat
ccaggtttcaaaggtgataaaggtgatgctggtctccctggacagccaggatcaatggat
aaagtggacatggacagtatgaagggccaaaagggagatcaaggagaaaaaggacaaatt
ggaccaattggagataaaggagccagaggagatcctggcactccaggagtacctggaaag
gatggacaagcagggactcctggtcatccaggtcctaaaggtgatccaggtcttggtgga
tctccaggctctccaggtctaccaggaccaaaaggttctgctggtgaaataggcaaacca
gggttacctggagaaaaaggagtccaaggaatcccaggctctcaaggtatcccaggcttc
cctggattaaaaggagaaaaaggagtgaaaggagaagctggtcgcccaggtattgggact
cctggacttcctggtgaaaagggagatcctgggccgtcaggctttccaggaagacctgga
gagaagggagaaaaaggaagccctgggattccagggatgcctggtcctccaggtcctgga
ggatcacctggagatataggctatccagggagccctggaatacctggagataagggtgac
aaaggacttcctggtctggatggtgttcctggagttaaaggagatgcaggtcagcctggc
cttccaggaccatcaggtccagttggcccaaaaggtgaaccaggtggtgatggaattcca
ggatcatctggtgagaagggtgaaccaggtcttccaggaagaggactcccaggatttcca
ggttccaaaggagaaaaaggttccaagggagagttgggcttcccaggattagctgggagt
ccaggaattcctggactcaaaggagaaccaggatttatgggtcctccagggccccctggg
caacagggaatacctggattacctggccgagcagtggaaggtcctaaaggagatagggga
ccacaaggtcaacctggcatacctggtgttcctggacccatgggccctccaggcctccca
ggacttgatggagcaaaaggagaaaaaggaaatccaggttggccaggatccccaggtgct
ccaggagttaagggagacccaggatttcagggcatgcctggcattggtggttcaccagga
atcactggttctaagggtgatatgggacctccaggtgttccaggatttcaaggtaccaaa
ggttctcctggcattcaggggctcaaaggagatcaaggggatcagggactcccaggttca
aaaggtgctccaggaccacctggtcccccaggtccttacaccctaatcaaaggagaagca
ggtgttcctggccctgagggcccagcagggcttaaaggtcttccaggtcttccaggccca
aaaggacaacaaggtgtcacaggatctatgggtgttccaggagcaccgggtgagccagga
tttgatggtgcacctggacaaaaaggagaaccaggaccctttggtcctcctggtccaaaa
ggacttcctggtccaccaggtccagatgggctgccaggttcaatgggtccaccgggtacc
ccttctgtagatcatggattccttgttactaggcatagtcaaactacagatgatccacag
tgtccccctgggaccaaaataatctacaatggttattccttgctctatgtacaggggaat
gaacgagcacatggacaggatttgggtacggctggaagctgtctacgaaaattcagtact
atgccattccttttctgcaatattaacaacgtttgcaactttgcatcaagaaatgactac
tcctattggttgtctactcctgagcccatgcccatgtctatggcacccatttttggtgaa
aatattaggtcatttattagtaggtgtgctgtatgtgaggctcctgccatggtgatggca
gtccatagtcagacaattcaaataccaccgtgtcctaatggatggtcatcactctggatt
ggctattcttttgttatgcataccagtgctggtgctgaaggttctggccaggccctagca
tctcccggttcctgtctggaagaatttagaagtgcacctttcattgaatgccatggtcgt
gggacttgcaattattatgcaaatgcttatagcttctggcttgctactatagaaagaaat
gagatgttcaagaggcctactccatcgactttgaaagcaggagaattgcgcacacacgtt
agccgctgccaagtctgtatgagaagaacataa
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