Macrotis lagotis (bilby): 141491779
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Entry
141491779 CDS
T11097
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
141491779 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mlao01009
]
141491779 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlao04515
]
141491779 (PCDH20)
Protein phosphatases and associated proteins [BR:
mlao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141491779 (PCDH20)
Cell adhesion molecules [BR:
mlao04515
]
Cadherins
Protocadherins
141491779 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF2967
Motif
Other DBs
NCBI-GeneID:
141491779
NCBI-ProteinID:
XP_074048705
LinkDB
All DBs
Position
6:complement(107989198..107994794)
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AA seq
972 aa
AA seq
DB search
MTAVSLGMNCPGNERRSRTLGVSWLPGNRQQPLDMGHLYGPRSSTSRRNLPHLLLFFLFV
GPFNCFASYSRATELFYSLNEGLPAGVLIGSLAEDLQLLPQAASAETAAAAGSEEDQQLP
QHHHHGEGWDPPLSFSLASQGLGGQYVTLDNRSGELHTSTQEIDREALCLDGGGGGGGGG
GGRNGISISSSPSSESCFLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVAQITVSVP
ENAPVNTRLAIEHPALDPDVGINGVQTYRLLDYHGVFTLDVEENENGERTPYLIVMGALD
RETQDQYVTIIIAEDGGSPPLMGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPV
AVVQAVDRDLGANAQITYSYSQKVPEVSKDLFHLDEATGVIKLFKKIGGNVLRLHKLTVL
ANGPGCIPAVITVLVTIIKVVFRPPEIVPRYIANEIEGVVYLKELEPINTPVAFFTIRDP
EDKYKVNCYLDGDGPFRLSPYQPYNNEYLLETAKSLDYETQQLYEITVVAWNSEGFHVKK
MIKIQILDDNDNAPVFTQPLIELSIEENNAPNAFLTKLHATDADSGERGQVSYFLGSDAP
SYFLLDKITGILTVSTQLDREEKEKYRYTVKAIDSGIPPRESIATVVITVLDKNDNSPRF
INKDFSFFVPENFPGFGEIGVISVTDADAGRNGWVALSVMNQSDIFVIDTGKGMLRAKVS
LDREQQSSYILWVEAVDGGEPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTL
PGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYR
LLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDISIEEKEPQISIEPTHR
KVESASCVPTLVALSVISLGSITLVTGMGIYICLRKGKKHHRENDNLEVQIPLKGKLDLH
MIERKPMEISNI
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtttcactgggaatgaactgcccagggaatgagaggcgctcacgaacccta
ggagtcagctggctgccggggaacaggcagcagcctctggatatggggcatctctacggt
cccaggagcagcaccagccggaggaacctgccgcatctgctcctgtttttcctcttcgtg
ggacctttcaactgcttcgcgagttacagtcgagccacggagctgttctacagcctgaac
gaggggctcccagcaggagtgctcatcggaagcctggctgaggacttgcagctgctcccc
caggcagcttcggccgaaacggcggcggccgcaggcagtgaggaagaccagcagctgccc
cagcatcaccaccacggagagggatgggatccccctctttctttcagcttggcgtcccag
ggcctgggtgggcagtacgtgacgctggacaaccgttcgggggagctgcatacttctacc
caggagatcgaccgggaggcgctgtgtcttgatggagggggaggagggggcgggggggga
ggtggtaggaatggcatctcgatctcctcctcaccttcctcagaatcttgtttcttgctc
ctggacgtgttggtcctgcctcaggagtacttccggtttgtgaaagtgaaaattgccatc
agggacatcaatgacaatgctcctcagtttcctgtggcccagatcactgtatcggttcct
gaaaatgcacctgtcaacacccgactggccattgaacatccagccctggacccagacgtg
ggcatcaatggggttcagacctatcgcctcttggactatcacggtgtctttaccttggat
gttgaggagaatgagaatggagagcgcaccccctacctcattgtcatgggggcattagac
agggagactcaagatcagtacgtaaccatcatcatagcagaagatggtggctctccacct
ctcatgggcagtgccactctcacgattggcatcagcgacattaatgacaactgtcccctt
ttcacagactcacagatcaatgtgactgtatatggaaatgctacagtgggcactcccgtg
gcagttgtccaggctgtggacagagacttaggtgccaatgctcagattacctactcctac
agccaaaaggttccagaggtatcaaaagacttattccacctggatgaagccactggagtc
attaaactcttcaaaaagattgggggcaatgttctccgattacacaagctcactgtactt
gccaatggaccaggctgcattccagctgtaatcactgtcctggtgaccatcatcaaagta
gtttttcgtccacctgagatagttcctcgttatattgctaatgaaattgaaggtgttgtt
tatttaaaggaactggaacccatcaataccccagttgcattttttactatcagggaccca
gaggataaatataaggtgaattgctacctggatggagatggaccattcagactatctccc
taccaaccatataataatgaatacttgttagaaactgctaaatctttggactatgagaca
caacaactctatgaaataactgtggtagcctggaactctgagggttttcatgttaaaaag
atgattaaaatacaaattctagatgacaatgacaatgcacctgttttcactcaaccattg
atagaattatctattgaggaaaataatgcaccaaatgcctttctaacaaagttgcatgcc
acagatgctgacagtggagagagaggtcaagtttcctatttccttggatctgatgcccca
tcatattttttgttagacaagattacagggattctgactgtatccactcagctggacaga
gaagaaaaagagaagtacaggtacacagtaaaggcaattgactctggaataccacctcga
gagtcaatagctacagttgtcatcactgtattggataaaaatgataatagccctaggttt
atcaacaaggattttagcttttttgtgccagaaaatttcccagggtttggtgaaattgga
gtaatcagtgttacagatgcagatgcaggacgaaatggatgggttgccctttcagtgatg
aaccaaagtgatatttttgtcatagacactggaaaaggcatgttgagagcaaaagtctcc
ctggatagggaacaacaaagttcctatattttgtgggttgaagctgttgatgggggtgaa
cctgccctctcctctactgcaaaaataacaattcttcttctggacatcaatgacaaccct
cctcttgtactttttcctcaatcaaacatgtcttatttgttggttctaccttctactctc
cctggctcaccagttacagaagtttatgctgttgataaagacactggtatgaatgctgtc
atagcttatagcatcataggaagaagaggtcctcggcccgaatcctttaggatagacccc
aaaactggtaacattactttggaagagtcattgatgcagaatgattatgggctttatcgc
ttgctggttaaagtgagtgaccatggttatcctgagcccctccattctactgtcatggta
aatctatttgtcaatgacactgttagcaatgagagctacattgagagtctattgcgaaaa
gaacctgacatcagcatagaggaaaaagaaccacaaatttcaatagaacctactcatcga
aaagtagaatctgcatcttgtgtgcccactttagttgccctatctgtgataagtttggga
tccatcacattagtcactgggatgggaatatacatatgtctaaggaagggaaaaaagcat
catcgagaaaatgacaatttggaagtacaaatcccactgaaaggaaagcttgacttgcat
atgatagagaggaaaccaatggagatttctaatatttga
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