Macrotis lagotis (bilby): 141496301
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Entry
141496301 CDS
T11097
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlao04121
]
141496301 (PDZRN3)
Enzymes [BR:
mlao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141496301 (PDZRN3)
Ubiquitin system [BR:
mlao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
141496301 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-TRAF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
IBR_1
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
141496301
NCBI-ProteinID:
XP_074054811
LinkDB
All DBs
Position
8:158667246..158943111
Genome browser
AA seq
1094 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCNLCHKVLEDPLTTPCGHVFCAGCVLPWAVQQGSCPVRCRRLS
AKELNHVLPLKSLILKLDIKCDHHGRGCPRVVKLQQLAEHVEACDYSPARCRHPGCGQVL
DRKDVEGHMRERCEARPAGLCQQGCGLGLTQRELRPGAHCCFQALKAHGGALQAQVAGLE
KELKREALRAGKREKALVAQLAAVQLELQMTALRYQKKFTHYSARLDSLSRSLAAPGAKG
EEMKTMTLVLHRDSGSLGFNIIGGRPCVLLMKLLTSKGPRTFLMSTLVEPSFLVYSDLDN
QEGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGKDLSKATHDQAVEAFKTAKEPIV
VQVLRRTPRTKMFTPSLDSQLVDMGTQTDITFEHIMALTKMASPTPPVLDPYLLPEEHSS
AHEYYDPNDYMGSIHQEMDRDELELEEVDLYRLNSQDKLGLTVCYRTDDEDDIGIYISEI
DPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEESKNVSLLIARPELQLDEGWL
DDDRNDFLDDLHMDMLEEQHHQAMQFTASVLQQKKHEEDEGTTDTATILSNQHEKDSGVG
RTDESTRNDESSEQENNADDHTTSSNTLGSQRKLMYSQDTLGSGDVPFSNESFISADCTD
ADFLGIPVDECERFRELLELKCQVKSASPYSLYYQNSTLEVNKSDPESVDRELEMLNEEL
RNIELECLNIVRAHKMQQLKEQYRESWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDK
DSSSAYNTGESCRSTPLTLEISPDNSLRRIAESISCQGSDGATSSSAACKASQRNLLSIT
ESPETSSPKYCPSPKELDLSKQLENKEKKANDESKSPSQSPKLGSSYLSSYHHSPYKHAH
IPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSSNQSEPRMEWKVKIRSDGTRY
ITKRPVRDRLLRERALKIREERSGMTTDDDAISEMKMGRYWSKEERKQHVVKAKEQRRRR
EFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPD
GTRVYNSFLSVTTV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcaacctg
tgccacaaggtgctggaggacccgctgaccaccccgtgcggccatgtgttctgcgccggc
tgcgtgctgccctgggccgtgcagcagggcagctgccccgtgcgctgccggcgcctgtcc
gccaaggagctcaaccacgtcctgccgctcaagagcctcatcctcaagctggacatcaag
tgcgaccaccacgggcgcggctgcccgcgcgtggtcaagctgcagcagctggccgagcac
gtcgaggcgtgcgactactcgccggcgcgctgccgccacccgggctgcggccaggtgctg
gaccgcaaggacgtggagggccacatgcgcgagcgctgcgaggcgcggccggccggcctg
tgccagcagggctgcggcctgggcctgacccagcgcgagctgcggcccggcgcgcactgc
tgcttccaggcgctcaaggcgcacggcggcgcgctgcaggcccaggtggccggcctggag
aaggagctgaagcgcgaggcgctgcgggccggcaagcgcgagaaggcgctggtggcgcag
ctggcggccgtgcagctggagctgcagatgacggcgctgcgctaccagaagaagttcacc
cactacagcgcccgcctcgactcgctcagccgcagcctggccgcgccgggcgccaagggt
gaagaaatgaaaacaatgactcttgtccttcatcgcgactctggctctctgggatttaat
attattggtggcagaccatgtgtgttattgatgaaactcttaaccagcaaaggtccaagg
acattcctgatgagcactttagtggagccctcctttcttgtctacagtgatttagataat
caagagggatcatccagtgaaggaatttttgtatcaaaaatagttgacagtgggccagct
gccaaagaaggagggctgcagattcatgaccggattatcgaggtgaatgggaaagactta
tccaaagcaacccatgatcaagctgtggaagctttcaagacagccaaagaacctattgtt
gttcaggtcttaaggcgaacccctcgaacaaagatgtttactccttcactagactcccag
ctggtggacatgggcacccaaacggacatcacctttgagcatatcatggcactgactaag
atggcatcccccacaccaccagtgttggatccgtatctcttgcctgaagagcattcatct
gctcatgaatattatgatccaaatgactacatgggaagcatccatcaggagatggacaga
gatgagcttgaactggaggaggtggatttgtaccgactgaatagccaagacaaacttggt
ctcactgtgtgttaccggacagatgatgaagatgacattgggatttatataagtgagatt
gatcctaacagcattgctgcaaaggatggacgcatacgagagggagaccggatcatccaa
attaatggtatagaggtacaaaaccgagaggaagccgtggcccttctcaccagtgaagag
agcaagaatgtctcattgctcattgcaagacctgaactccagctggatgaaggatggctg
gatgatgatagaaatgattttctggatgacttacacatggacatgctggaagaacagcac
caccaagctatgcagttcacagcaagcgtgcttcaacagaaaaaacacgaggaagatgaa
ggtaccactgacactgccacgatcttgtcaaaccaacatgagaaggacagtggtgtgggg
cgcaccgacgagagcacccgaaacgatgagagctccgagcaggagaacaatgccgatgac
cacaccacatcttctaacactctggggagccagaggaagctgatgtacagccaggacacc
cttgggagcggagacgtgcccttcagcaatgagtcctttatctcagctgactgcacagac
gctgacttccttgggatcccagtggatgaatgtgagcgatttcgcgaactcctcgaactc
aagtgccaagtgaagagtgccagtccctacagcctctattatcagaacagcaccctcgaa
gtgaacaagagtgaccctgagagcgtggacagagaactggagatgctgaacgaagaactc
cgcaacatcgagttggaatgtctgaacattgtcagggctcataagatgcagcagctgaag
gagcagtaccgagaatcgtggatgctccacaacagcggattccggaattacaacaccagc
atcgatgtgcgaaggcacgagctctcggacatcaccgaactccctgagaaatctgacaaa
gacagttccagtgcctataacactggagagagctgtcgcagcaccccactcaccctggaa
atctcccccgataactccctgcggaggatcgcagaaagcatcagctgtcaaggcagcgat
ggggcgacgagcagctccgccgcttgcaaagcatcccagaggaatctgctctccatcaca
gaaagtccagagaccagcagccccaagtactgcccttctccaaaagagcttgaccttagc
aaacagctagagaacaaagagaagaaggccaacgatgaaagcaagagtccatcccagagt
ccaaaattaggcagttcctatctctcttcctaccaccactctccctacaagcatgcacac
atccctgcccatgcccaacactaccagagttacatgcagctgatacagcagaagtcagcg
gtggagtacgcccagagtcagatgagtctggtcagcatgtgcaaggacttaaactcttct
aaccagagtgaaccccgaatggaatggaaggtgaagataagaagcgatgggactcgctac
atcaccaagaggccggtgcgagacaggctgctgcgtgagcgagccctgaagatccgggaa
gagcgcagcggcatgacaacggatgatgatgccatcagcgagatgaagatggggcggtat
tggagcaaagaggagcggaagcagcatgtcgttaaagcgaaggaacagcggagaaggcgc
gagttcatgatgcagagcaggctggattgccttaaggagcagcaaggggccgaagaaaag
aaggaaatgaacatcattgaactgagccacaaaaagatgatgaagaagaggaacaaaaaa
atctttgataattggatgaccatccaagaactcttaacccacggtacaaagtcccctgat
ggcactagagtatacaattccttcttatcagtgactactgtataa
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integrated database retrieval system
