Macrotis lagotis (bilby): 141496500
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Entry
141496500 CDS
T11097
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141496500 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141496500 (CNOT1)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141496500 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141496500 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
141496500
NCBI-ProteinID:
XP_074055119
LinkDB
All DBs
Position
1:complement(41954149..42054154)
Genome browser
AA seq
2385 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFVKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYSEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLQNVVYGIQRGLGLEGFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTAALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPPDVSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYESKMYFFGIAALDR
FKNRLKDYPQYCQHLASISHFMRFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTL
LVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKR
VSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHW
LGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPW
TMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLEEQLSA
PKKDVKQPETLPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNP
TIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMR
IAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQD
NCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIR
LKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYEKCITE
LEQHLHAIPPALGMNPQSQTLRSLLDAVVMSRNSRDAIAALGLLQKAVEGLLDATSGADA
DLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVN
MQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHS
RGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLRE
WVNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISY
RAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVV
GVLLQDHDVRQNEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKA
PGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELSKPMQIL
YKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLK
VDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYN
IQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIA
NQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIK
NPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaatcgacacggc
ccggaggcagataggcatttattacgctgcctattttctcatgtggatttcagtggcgat
ggtaaaagtagcggcaaagattttcatcagactcagtttctgattcaggagtgtgcatca
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtctaaagccttcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaggttcaagaggtcatttttggtcttgctctcttgaattcttccagctctgat
ctacgaggttttgctgcccaatttgtcaaacagaaacttccagatcttctgcgctcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgccatagaggtc
ctgcacctcctcctctcccatctcctttttgggcagaagggagcttttggggttggacag
gagcagatagacgcttttcttaagacactgcgtagagattttccccaggaacgttgtcct
gtggtgcttgcaccactactttactctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagctaaaaccatgatggagagctctctggcagacttcatgcaa
gaagtaggctatggcttctgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgagaggtcacagctgctcaggttgccagggttttgggaatgatggctcggact
cattcaggattgacagatggcataccattacaatctatctcagctcctggaagtggtata
tggagtgatggaaaagataaaagtgatggagcacaggcccatacctggaatgttgaagtc
ttgattgatgttctcaaagagttgaatccaagtttaaatttcaaggaagtaacttatgaa
ctggaccaccctggatttcaaattcgagacagcaaaggacttcagaatgtggtatatggc
attcagagaggtttaggcctggaaggcttcccggtggaccttatttatagaccttggaaa
catgcagagggccagctctccttcattcagcattcattgataaatccagagatcttctgt
tttgctgactatccctgtcacacagttgccactgatatcctcaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggacttgattgaatctctcttgcgactg
gcagaggtggggcagtatgaacaggtcaaacaactcttcagctttcccatcaagcactgc
ccagatatgttggttttggccttactacagatcaacacttcttggcatacactgcgccat
gaactcatctccaccctaatgccaatctttcttggaaatcatccaaactcggccattatt
ttgcactatgcctggcatgggcagggacagtctccctcaattcgccagcttatcatgcac
gccatggcagaatggtatatgcgaggggaacagtatgaccaggccaaattatcacggatt
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgtcgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcgtgcatgactttctta
aagagacggtgcccttccatcttgggcggccttgccccagaaaaagatcagccaaaaagt
gctcaacttcctccagaaacactagcaacgatgttggcttgtcttcaagcttgtgcaggg
agtgtttctcaagaattgtcagagaccatcctaaccatggttgccaattgtagtaatgtt
atgaataaagctcgacagccccctcctggagttatgccaaaaggacgtccccctagtgca
agcagcttagatgccatttctccggtacagattgacccccttgctgggatggcatctctt
agtataggaggttcagctgccccccatacccagagtatgcagggttttcctccaaatttg
ggttctgctttcagtacccctcagtcaccagcaaaagcctttccacccctttccactcca
aatcagactacagctttcagtggcattggaggactctcttcacagcttccagtaggtggc
cttggcacaggtagcttgactggtattggaactgcggctctgggactccctgcagtgaat
aatgatccttttgttcagaggaagctgggcacctccggactgaaccagcctacattccag
cagagtaagatgaaacctccggacgtgtctcaggtatggccagaggcgaaccagcacttt
agtaaagagattgatgatgaagcaaacagctattttcagcgcatttataatcatccaccg
catccaaccatgtctgttgatgaggtattagaaatgttacagaggtttaaagactccaat
attaaaagggaacgagaagtgtttaattgtatgctgaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagagctgcacatcacagcctgcctgtttggtggcatc
atagagaaaggactggtgacttacatggcgcttggtctggccttgcgctatgttcttgaa
gccttacgcaagccttatgaatccaaaatgtatttttttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtactgtcagcacttggcttccattagtcac
tttatgcggtttcctcatcatctgcaggagtacattgaatatgggcagcaatctagagat
cctcctgtgaaaatgcagggttcaattactacccctggaagtattgcacttgcccaggcc
caggcccaggcccaggcccaggttccagcaaaggcccctcttgctggtcaagtcagcact
attgtaaccacctcaacaaccaccactgtggctaaaaccatcacaatcaccaggcccacg
ggtgtcagcttcaagaaggatgtgccgccatctattaatactacaaatattgataccctg
cttgtggctacagaccaaactgagagaattgtggagcctccagaaaatgtccaggaaaaa
attgctttcatcttcaacaatctttctcagtctaacatgacacaaaaagttgaagagttg
aaggaaacagttaaagaggagtttatgccttgggtttcacaatatcttgtcatgaagaga
gtcagtatcgagccaaactttcacagcctttattccaattttcttgatactcttaagaat
cctgaatttaataagatggttctgaatgagacctacagaaatattaaagtgcttctgaca
tcagataaagcagcagccaatttctcagaccgctccttgctgaagaacctgggccactgg
ctggggatgatcacattagccaaaaacaaacccatcttacacacggacttagatgtaaaa
tctttgctgttggaagcttatgttaaaggacagcaagaattgctgtatgtggtacccttt
gttgccaaagtcttagaatccagtgttcggagtgtggttttcagaccaccaaatccttgg
acaatggcaattatgaatgtattagctgagcttcaccaagaacacgatttaaagttaaac
ttgaagtttgagattgaggttctctgcaagaatcttgccctggacatcaatgaactaaaa
cctgggagtctcctgaaagacaaagacagactgaagaacttagaagaacagctttctgct
cctaaaaaggatgtcaagcaaccagagacacttcctcccatcacaaccaccactacttct
actaccccagctaccagtaccacttgtacagctactgttcctccacagcctcaatacagc
taccatgatatcaatgtctattcactgggaggtctggctccacacattacactcaatcct
acgattccattgtttcaggcccatccacaattgaagcaatgtgtccgtcaagcaattgaa
cgggctgtccaagagcttgtccatccagtagtggatcggtcaattaagattgccatgact
acttgtgaacagattgttaggaaagattttgcactggattctgaggagtcacgcatgcgc
atagcggctcatcacatgatgaggaacctgactgctggcatggctatgatcacttgcagg
gaaccattactcatgagcatagctaccaacttgaaaaacagctttgccacagcactacga
gctgcatccccccagcagagggaaatgatggagcaggcagcagcacagctagctcaggac
aattgtgaattggcatgctgcttcatccagaagactgcagtggaaaaagcaggtccagaa
atggacaagaggctggcaactgaatttgagcttcgaaaacatgcaaggcaagagggacgc
aggtactgtgatcctgttgttttgacataccaggctgagcggatgccagagcagatcaga
ctgaaggttggtggtgtagacccaaaacagctggctgtttatgaagagtttgcacgtaat
gttcctggcttcttgcctacaaatgatttaactcagccgacaggatttttagctcagcct
atgaagcaagcttgggctaccgatgatgtagcacagatctatgaaaaatgtatcacggaa
ttggaacagcacctgcatgccattcctccagccttaggcatgaacccccagtctcagact
ctccgtagccttctggatgctgttgttatgtcacgcaactctcgggatgccattgccgcc
ctgggcttgctgcagaaggctgttgagggcttgcttgatgccacaagtggggctgatgct
gacctgctgctacgttaccgggagtgtcaccttcttgtcctgaaagctttacaggatggt
cgagcctatgggtctccatggtgtaacaaacagatcacaaggtgcctgattgagtgtaga
gatgagtataaatataatgtggaagccgtggagttgttgatccgtaatcatctagtgaat
atgcagcaatatgatcttcacctggctcagtcaatggagaatggtttgaactacatggct
gtggcatttgctatgcagttggtgaagatcctgctggtggatgaaaggagtgtggcccat
gtgactgaggcagatctgtttcataccattgagaccctgatgagaatcaatgcacattcc
cgtggaaatgccccagaagggttgccccagctgatggaagtggtgcggtcaaactatgag
gccatgatcgaccgtgcacatggggggcccaacttcatgatgcactctggcatctcacag
gcctctgagtatgatgacccccccggcctgcgggagaaggcagaatacctgctgcgggag
tgggtgaacctctaccactcggcagccgctggccgtgatagcaccaaagccttctctgct
tttgttggacaggtagagcttttggagagaaagatgcaccagcagggaattctgaagact
gatgacctcataacaaggttttttcgcctgtgcactgaaatgtgtgttgaaatcagctac
cgggcccaggctgagcagcagcacaatcctgctgccaaccccacaatgatccgggccaag
tgttaccacaacctggatgcctttgtgcgtctcattgcattgctggtcaagcactcaggg
gaggccacgaacacagtcaccaagatcaacctcttaaacaaggttctgggtatagtagtg
ggcgtcctcctacaggatcatgatgttcgacaaaatgagtttcaacaacttccctatcac
cgaattttcatcatgttgctcttagaactaaatgctccagaacatgtgttggaaaccatt
aatttccaaacacttacagctttctgcaatacattccacatcttgaggcctactaaagcc
ccaggctttgtctatgcctggctggaactgatctcccatcggatatttattgcaagaatg
ttggcacacacaccacaacagaagggctggcccatgtatgcacagctattgattgattta
ttcaagtatttagctcctttccttagaaacgtggaactcagcaaacctatgcaaatcctc
tataagggtactttaagagtgctgctggttctcttgcatgatttcccagagtttctttgt
gactaccactatggtttctgtgatgtaatcccgcccaattgcatccagttacggaatctg
atcctgagtgcctttccacgaaacatgaggctcccagacccattcactcccaacctgaag
gtggacatgttgagtgaaatcaacattgctcctcggatcctcacaaacttcacaggagtg
atgcctcctcagttcaaaaaggatttggattcctatcttaaaactcgatcgccagtcact
ttcctgtctgatttgcgcagtaacctacaggtttcaaatgagcctggcaatcgctacaac
attcagctgatcaacgcactggtgctctatgttggtactcaggccattgcccacatccat
aacaaaggcagtacgccgtccatgagcaccatcactcactcggcgcacatggacatcttc
cagaacttggctgtggatcttgacacagaaggtcggtacctcttcttgaatgcaattgcc
aatcagctgcggtatccaaacagccacactcactacttcagttgtaccatgctctatctt
tttgcagaggccaacactgaagctatccaggaacagatcaccagggttctcttggaacgg
ttgattgtaaataggccacatccttggggtctcctcattaccttcattgagctgattaaa
aatccagcatttaagttctggaaccatgagtttgttcactgtgccccagaaattgaaaag
ttgttccagtcagttgcgcagtgctgcatgggacagaagcaggctcagcaagtgatggaa
gggactggggccagctaa
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integrated database retrieval system
