Macrotis lagotis (bilby): 141496703
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Entry
141496703 CDS
T11097
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlao04131
]
141496703 (VPS50)
Membrane trafficking [BR:
mlao04131
]
Protein recycling
Others
EARP complex
141496703 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
ING
DegS
Motif
Other DBs
NCBI-GeneID:
141496703
NCBI-ProteinID:
XP_074055465
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All DBs
Position
8:196776976..196830186
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AA seq
986 aa
AA seq
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MQKIKSLMARQGLKSPQDGVGELSPIENLRLPSKEELRELREQPIDPQAQQEIINSIEDV
YFSTDSFDIVKYEMEKLPPILNLQDLEAYRDKLKQQQAAMRKLRPREVKWKIWALQLITS
RVSKKVADLILEKQPAYVKELERVTSLQTGLQLATVMCTNGRRHLNIAKEGFTQASLGLL
ANQRKRQLLVGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQQAASTFRHYSC
ISELDSKLQDTLEQIEEQLDVALSKICKNFDVAHYTKVQQAYRLLGKTQTAMDQLHMHFT
QAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTTDSYIPCLADLCKALWEVMLS
YYRTMEWHEAHDNEDTTRVAEGSGTADSEESNFDRNYVKKKLEHGLSRIWQDVQLKVKTY
LFGTDMSTFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQESIRKQSINYFKNYHRTRLD
ELRMFLENETWELCPVKSSFSILQLHEFKFMEQSRSPSVSPSKQPATAAAAATTLFEQYS
SGGNPFEIQANSKDEESEDVLASNGYESDEPEKSAYQDYDSDSDVPEELKRDYVDEQTGD
IPVKSVSRETLRSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMSMLKPIAFDVVHF
LSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDLEVCIDPTGSLTA
GEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVK
KPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLMMASVKWDVKEIMSQHNVYVDT
LLKEFEQFNRRLTEVSRRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSSKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtccctcatggcccgtcagggtctcaagagcccccaggacggcgtc
ggggagctgagccccatcgagaacctccggctgcccagcaaggaggaattacgggagctt
cgagaacagcccatcgacccccaagctcaacaagaaatcatcaacagcatcgaggacgtt
tacttctcgactgactcatttgatatcgtgaagtatgagatggagaagctccctcctatt
ctcaatctgcaagatttggaggcttacagagacaagctgaaacagcaacaagctgctatg
aggaaactgagacccagggaagtaaagtggaagatctgggcccttcagctcattacttcc
agggtctctaagaaagtcgcagatttgatccttgaaaagcagcctgcttatgtcaaggag
ctcgagagagtgacctccctacagactggccttcagttggccacggtcatgtgcaccaac
ggaagaagacacctgaatatcgcaaaggagggttttactcaggccagtctgggcctgctt
gcgaaccagaggaagcgccagctgctggttggcctcttgaaatccttgaggaccataaag
acactgcaaagaactgatgtgcgtttgagtgagatgctggaggaggaagattatcctgga
gctatccagctttgtcttgagtgtcagcaagcggccagcacattccgacactatagctgc
atcagtgagctggactccaagctgcaggacaccctcgagcaaattgaagagcagttggat
gtggcactctccaaaatctgcaagaactttgatgtggcccactacaccaaggtgcagcag
gcctacaggctcctggggaagacacagaccgcaatggaccagttgcacatgcactttacg
caggccatccacaacaccgttttccaggtggtcctgggctacgtggagttatgtgcaggc
aacacggacaccaagttccagaagcttcagtacaaggatctctgtacacatgtgacgact
gacagctacatcccgtgcctggctgacctctgcaaagccctatgggaagttatgctcagc
tattacaggaccatggagtggcatgaagcccatgacaatgaggataccaccagggtggct
gaagggagtggcacggcagactcggaggagagtaattttgaccgcaactacgtgaaaaag
aagcttgaacacggactgtcgcgaatatggcaggatgtccaactcaaagtgaaaacctat
ttgtttgggactgatatgtctacattcaagtatgacgacttcatctttgtcttggacata
atcagcaggctgatgcaagtcggtgaagagttctgtggcagcaagtctgaagttctgcag
gaatccatccgaaagcagagcatcaactacttcaagaattaccacagaactcgacttgac
gagctgagaatgttcctggagaatgagacctgggagctgtgccccgtgaagtcgagcttc
agcatcctgcagcttcacgaatttaaattcatggagcagtcacggtccccgtcggtgtcc
cccagcaaacagccagccaccgcggccgctgcggccaccaccttgtttgagcagtacagc
agtggggggaacccctttgagattcaggccaacagcaaagatgaggagtctgaggatgtc
ctggcttccaacgggtatgagtctgatgagcccgagaagagcgcctaccaggattatgac
agcgacagtgacgtcccggaggagctgaagcgagattatgtggatgagcagactggggac
atccctgtgaagagcgtctcccgagaaacactaaggagccggaagaaatcggattatagt
ctgaataaagtcaacgcccccatcctgaccaatactaccttgaacgtcattcggctggtt
gggaaatacatgcagatgatgagtatgctgaagcccattgccttcgacgtggttcacttt
ctgtctcagctgtttgactattacctctatgccatctataccttctttggtcgcaatgac
tcgctggagtccacaggcctgggcctcagcagcagccgcctgcgaacaacactgaaccgg
atccaggaaagtttgattgatctggaggtttgcatagaccccacaggctcgctcacagct
ggtgaggagaggaaggagaaggtgccgagtccacacctcagtcacctggtggttctgaca
tctggggacacactatatggattggcagagagagtggttgccacagagtccttggtcttc
cttgctgagcagtttgagttcctgcagccccacctggatgctgtgatgccggcagtgaag
aagcccttcctgcagcagttttattctcagacggtctcgactgccagtgagctgcgcaaa
cccatctactggattgtggcgggaaaggcgattgactacgagcagatgctacttatgatg
gccagtgttaagtgggatgtcaaggagattatgtcccagcacaacgtctacgtggatact
ttgctgaaggagtttgagcagtttaacaggagactgaccgaggtatcgaggagggtccga
atccccttgcctgtgtccaatattctctgggaacactgcatacgcctggccaaccggacg
attgtggaggggtacgccaatgtgaagaagtgtagcaacgagggtcgggccttgatgcag
ttggacttccagcagtttctcatgaaacttgagaagctgacagacatcaggcccatccca
gacaaggaatttgtggagacctacatcaaagcctattatctgacggagaatgatatggag
cgatggatcaaggagcaccgggagtactcctccaagcagctgaccaacctggtgaatgtc
tgcctgggctcgcacatcaacaagaaggcacggcagaagctcctggcagccatagatgac
attgacaggcccaagagatag
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