Macrotis lagotis (bilby): 141499086
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Entry
141499086 CDS
T11097
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03013
Nucleocytoplasmic transport
mlao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141499086 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
141499086 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141499086 (THOC1)
03041 Spliceosome [BR:
mlao03041
]
141499086 (THOC1)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
141499086 (THOC1)
Spliceosome [BR:
mlao03041
]
Complex C
Other components
EJC/TREX
141499086 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141499086 (THOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
141499086
NCBI-ProteinID:
XP_074058112
LinkDB
All DBs
Position
X:complement(456158796..456228523)
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AA seq
665 aa
AA seq
DB search
MSPSPPLFSLPEARTRFTNSTRDALINKNIKPLLSTFSQLAGSENEKKCTLDQAFRVILE
EEIITRASCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHIEDKEEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESMRSVCHRPSDSKPTRVI
RKRTAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQ
ADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL
PPPSEEIKTGEDEDEEDNDALLKENNESPDVRLDKPVTGDQIELFAQKLGEQWKILAPYL
EMKDCDIRQIECDSEDVKMRAKQLLVAWQDQEGIHATPENLINALSKSGLNDLAESLTND
TETSS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtcgccgcctctcttcagtctgcccgaagcgcggacccggtttacgaattct
accagagacgccttgatcaacaaaaatatcaagccattattgagcaccttcagccaatta
gctggcagtgaaaatgagaaaaaatgtacccttgatcaagctttcagagttattctagaa
gaggaaattataacccgtgcttcatgtgaaaatgttttggcaattatttctcttgctatt
ggtggagtcactgaaggtatttgtacagcatctacaccttttgtactattgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatcttcacctttgtggagaaaaatgtt
gcaacttggaaatcaaatacattctattctgctggaaaaaactatttattgcgcatgtgc
aatgatctcctaagaagattatcaaagtcccagaatacagtgttctgtggaaggattcag
cttttcttggccagactttttcctttgtcagagaaatcaggccttaacttacagagccag
tttaatcttgaaaatgttactgttttcaataccaatgaacaagagagcaccttgggtcag
aagcacattgaggataaagaagagggaatggaagtagaagaaggagaaatgggagatgat
gaagctccaacaagttgctccattccaattgattacaacctgtatagaaaattttggtca
cttcaggattacttcagaaatcctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaggttttagctgtgtttaaaagttataaactggatgatactcag
gcctcaagaaagaagttagaagaattgaaaacaggaggagaacatgtatattttgcaaaa
ttcttaacaagtgaaaagcttatggatttacagctgagtgatagtaactttcgtcgtcac
atccttctacagtatctcattttatttcagtacctcaaggggcaagtgaaattcaaaagt
tcaaactatgttctaactgatgagcaatccctgtggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccctgatggagagagattttcaaaaatggtagagcat
atattaaacactgaagaaaattggaactcatggaaaaatgaaggttgtccaagttttgtg
aaagaaagtatgcgttctgtttgccatagaccatcagactccaaacctacaagagttata
cgaaagagaacagcaccggaggatttcctggggaaaggacccaacaaaaaaattctgatg
ggaaatgaagaattaacgagactttggaatctctgtcctgataacatggaagcttgtaaa
tcagagtctagagaatacatgccaactttagaagaattttttgaagaagccattgagcaa
gcagacccagaaaatatggttgaaaatgaatataaggctgtaaacaattccaattatgga
tggagggctctaagactgttagcacgtcgcagtccccacttcttccagccaaccaatcag
cagtttaaaagtttaccagaatatttagaaaacatggttataaaactagccaaggagtta
ccacctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagataatgatgct
ttactgaaggaaaataatgagagtcctgatgttcgacttgacaaaccagtaacaggggac
caaatagaactgtttgctcagaagttgggagaacagtggaaaatattggctccgtactta
gaaatgaaagactgtgatataagacagattgagtgtgacagtgaggatgtgaagatgaga
gctaagcagttgctagttgcttggcaggatcaagagggaatacatgcaacacctgagaat
cttattaatgcattaagtaaatctggattaaatgaccttgcagaaagtctaactaatgac
actgaaacaagtagttaa
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