Macrotis lagotis (bilby): 141499440
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Entry
141499440 CDS
T11097
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141499440 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141499440 (EDC4)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141499440 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
141499440 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Motif
Other DBs
NCBI-GeneID:
141499440
NCBI-ProteinID:
XP_074058257
LinkDB
All DBs
Position
1:complement(62237737..62255215)
Genome browser
AA seq
1399 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPPGGSSTESQRTSSSYNGDLNGLLVPDPLSSGDGT
VLSKPSHRTATLASLEEKQIIRLSGDDSSTCIGISAKEVEIVASTDSNISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRGASNGSAMVRVISVSTAERTLLKGFTGSV
ADLAFAHLNSPQLACLDESGSLFVWRLAMENNKIQEEIVVNIKRSEGTPLNHFRRIIWCP
YIPEENEESSEEGSQTLALLHEDRAEVWDLDILRANNSSWPVDVRDIKEGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPDSSLFCRVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFCPDMFSPVSVPPSLKAC
LDLSAEYLILSDVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLR
HTEVLPAEEEGDSLSTEGSHGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPQQSPDVVA
PLPSHSTREDFGFGEHLPELNSENLASGQGSGQGSQPDLRRIADLPVPSDFLSLTNDVKP
KLMTPDAFMTPSASLQQITVSPGSSGGSLTTVTSLNTTSATDTTMSRPPEELTLSPKLQL
DSSLTLSSSSSSLQASPRGHSVLIPGLSDKLATKGPSQVPQGNPSLSLELQEVEPLVVPQ
ASPTRARSPDVISSASTALSQDIPEIASEALSRGFGTTAPEGLEPDSMASAASALHLLSP
RPRPGPEHGPQHSLDGSPGEGERRSTPSLLETALSQDTSAPDSKAWPAAPDITRETRNSL
AGSPRDDVQEKHKGSSYHRHAYHLLQQDSQDASAEQSDHDDEVASLASTSGGFVAKATAP
RLPVKDWKTKGSPRASPKLKRKGKKDDGDLAQGPWLVEHQAAEPPEEWLALVRGQQRELA
ELRQSHAELLQRLTDQLDSVQSSIMGHVERVLESRQEHEQRRLERALAEGQQRSGQLQEH
LSQQLSQALSSAVAGRLERTVREEMKKTIPQCVSKSLEPVTSQLSGTVAAKLTAVEGTLK
ENVTKLVKSKNLTDTIARAAADTLQGPMQTAYREAFQSIVLPTFEKSCQAMFQQINDSFK
LGTQEYLQQLENHMKSRKAREQEAREPVLAQLRGLVGTLQSATEQMAATVSSSVRAEVQH
QLHIAVSNMQESILSQVQHIIKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPIPAAHLDCQ
AQQAHILQMLQQGHLNQAFQQALTAADLNLVLFVCETVDPQQVFGQPPCPLSQPVLLSLI
QQLSSDLGTRTELKFSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLS
KSARRLTIMLQGLAVPGLN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgccagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctgaagctggaccggccgcccggaggctcaagcacagaaagccagcggacatccagctcc
tacaatggagatctgaatgggcttctggtgccagaccccctttcttctggggatgggact
gtcctgtccaagccaagtcaccgaacagctaccttggctagcctggaggagaagcagatc
atccgtctttctggagatgatagctccacttgcattggaatttcagcaaaggaggtggaa
atagtggctagcactgactccaacatctcaagcaaggctcggggcagcaacaaggtaaaa
atccagccagtggccaaatatgactgggaacagaaatactattatggcaacctgattgct
gtgtctaattccttcttggcatatgccatccgaggtgccagcaatggttcagccatggtg
cgagtgatcagcgtcagcacagcagagcgcacactgctaaagggcttcacaggaagtgtg
gctgacttagcctttgcacacctcaactctccccagttggcctgcctggatgaatcgggc
agcctttttgtgtggcgcctggccatggagaacaacaagatccaagaggagattgtggtg
aacattaagcgttcagagggtaccccactgaatcacttccgaaggatcatctggtgtcca
tatatcccagaggagaatgaggaaagcagtgaagagggcagccagactctggccctgctg
catgaagacagggctgaagtatgggacctggacattctccgagccaacaacagctcctgg
cctgtggatgtcagagacatcaaggaaggcttcatagtggttaagggccatagcacgtgc
ctgagtgaaggagctctctccccggatgggaccgttttagccactgctagtcatgatggc
tttgtcaagttttggcagatctatatagaaggccaggatgagccaagatgtctccatgaa
tggaagcctcatgatgggaggcctctctcctgtctcctattctgtgacaaccacaagaaa
caagaccctgactcctccttgttttgcagagtccccttttggaggtttctcatcacagga
gctgaccaaaaccgggaactaaagatgtggtgcactgtgtcatggacctgcttgcaaacc
atccggttttgtccagacatgttcagcccagtgagtgtgcctcccagcctcaaggcctgc
ctggatctttcagctgaatacttgatcctcagtgatgtgcagagaaaggtgctgtatgtg
atggagctgctgcagaaccaggaggagggcagggcctacttcagctccatctcagaattt
ctgctcacccaccctgtgctgagttttggtattcaggtggtaagccgatgccggcttcgg
cacacagaagttctcccagcggaggaggagggtgacagcttaagcacagagggttcccat
ggagctggggcagtggagtcagcagctggtgtactgatcaagctcttctgtgtccacacc
aaggctctgcaggatgtccagatacgcttccagccccagcagagccctgatgtggtggcc
ccactgccttcccactcaacccgagaagactttgggtttggagaacacctgccagagctg
aattcagaaaatctggcctctggccagggttctggccagggctctcagcctgaccttcgg
cgcatcgctgacctgcctgtcccttctgactttctcagcctgactaatgacgtcaagccc
aagctcatgactcctgatgccttcatgactcccagcgcttctctgcagcagatcacagtg
tccccaggaagcagtgggggttccttaacaactgtgacatccttgaataccacctctgcc
acagacacgaccatgtcccggccacctgaggagctgaccctgagccccaagctgcagcta
gacagcagtctgaccctcagcagcagcagtagcagccttcaggctagtccccgtggccac
agcgtcctcatcccaggcctctctgataaactagctaccaaggggcccagccaggtccca
caagggaatccatcactgtccctggagctgcaggaggtagagcccctggtggtgccacaa
gcctctccgacccgggcccgctcccccgacgtcatctcctcagcctctacagccctatcc
caggacattcctgagattgcctcagaggctctctcccgagggtttggcaccactgctcca
gagggccttgagcctgacagcatggcatctgctgcctcggccctacacctgctttccccc
cgaccccggcccggccctgagcatggcccccaacacagcttggatgggagtcctggggag
ggggaaaggcgaagcacaccttccctgctggagacggcgctgagccaggataccagtgct
cctgacagtaaggcctggcctgctgcacctgatatcacccgtgagacccgcaacagcctg
gctggcagtcccagggatgatgttcaagagaagcacaaaggctcttcctaccaccgccat
gcctaccatctgctgcagcaggacagccaggatgccagtgctgagcagagtgaccatgat
gatgaggtggccagcttagcctcaacctcaggtggttttgttgccaaagcaacggcccca
cgactaccagtgaaggactggaaaaccaaggggtctcccagggcctcacccaagctgaag
agaaagggcaagaaggatgatggggacttggcacaaggcccctggctggtagaacaccag
gcagcagaacctcctgaagagtggttggccctggttcgagggcagcagcgggagcttgct
gagctgcggcagagtcacgccgagctgttgcaacggttgacagatcagctggactccgtg
caaagctcaatcatgggccatgtagagagagtcctggagtctagacaagagcacgagcag
agacggttagagcgggccctggctgaggggcagcagcggagtggacagctgcaggaacac
ttgtcccagcagttatctcaggccctgtcctcagctgtggcaggccgactggagcgtaca
gttagagaggagatgaaaaaaacaattccccagtgtgtctccaaaagcttggagccagtg
acaagccagttgagtggcactgtggcagccaagctgacagcagtggaaggcaccctcaag
gagaatgtcaccaagctggtcaagtccaagaacttgactgatacgatagcccgtgcagca
gcagatacgctacagggacccatgcagactgcctaccgagaggccttccagagcattgtg
ctgcccacttttgagaagagctgccaggccatgttccagcagatcaatgacagcttcaaa
ctgggcacccaggaatacctgcagcagttagagaaccacatgaagagtcggaaggccaga
gaacaggaagcacgagagccagtgctggctcagcttcgaggactagtgggcaccctacag
agtgccacagagcagatggcagccactgtgagcagcagtgttcgggccgaggtccagcac
cagctccacattgctgtgagcaacatgcaggagtccatcctgtcccaggtccagcacatt
atcaagggagaagtgagcctggccatgaaggagcagcaggcagcagtcacttccagcatc
atgcaggcaatgcgttctgctgctggcacacccatcccagctgcccacttggattgccag
gcccaacaggcacacatccttcagatgctccagcagggccacctcaaccaggctttccaa
caggccctgactgcagctgacctgaacctggtgctctttgtctgtgagactgtggatcca
cagcaagtgtttggccagccaccttgtcctctgtcccagcctgtcctgctttccctcatc
cagcagctctcctctgacctgggaacccgcacagaactcaaattcagctacctggaggaa
gctgtgatgcacctggaccacagtgaccccatcaccagggaccatatgggctcagtcatg
gcccaggtacggcagaagctattccagttcctccaggctgaacctcacaactcactcagc
aagtctgctcggcgtctcaccatcatgctgcagggcctggctgttcctgggctcaactag
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integrated database retrieval system
