Macrotis lagotis (bilby): 141501270
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Entry
141501270 CDS
T11097
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141501270 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141501270 (XAB2)
03041 Spliceosome [BR:
mlao03041
]
141501270 (XAB2)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141501270 (XAB2)
Spliceosome [BR:
mlao03041
]
Complex B
Other components
Prp19-related factors
141501270 (XAB2)
Complex C
141501270 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
Suf
TPR_19
TPR_8
TPR_15
ARM_TT21_C
TPR_MalT
ARM_TT21
TPR_16
TPR_1
RPN7
Motif
Other DBs
NCBI-GeneID:
141501270
NCBI-ProteinID:
XP_074061199
LinkDB
All DBs
Position
X:655237270..655247490
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AA seq
865 aa
AA seq
DB search
MPEVGEEAPTEAKLKTRPERPDLFFEEEDLQYEEEILRNPFSVKCWFRYIEFKQSASQAV
LNLLYERALKELPGSYKLWYHYLKARRAQVKRRCVTDPAYEDVNNCHERALVFMHKMPRL
WLDYCQFLMEQGRITRTRRTFDRALRALPITQHSRIWPLYLRFVRSHPLPETAVRVYRRF
LKLSPESAEEYIEYLRSIDRLDEAAQRLATVVNDERFVSKEGKSNYQLWHELCDLISQNP
DKVQSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDF
TQVFDSYAQFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQ
NPHHVHEWHKRVALHQGRPREVINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEENEQLE
DARTILEKATKVNFKQVEDLASVWCEYGEMELRHDNYDQALRLLRKATALPARRAEYFDS
SEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYERILDLRIATPQIVINYAMFLEEHS
YFEESFKAYERGISLFKWPNVSDIWSTYLTKFITRYGGRKLERARDLFEQALDGCPPKYA
KTLYLLYARLEEEWGLARHAMAVYERATLAVEPSQQHEMFNIYIKRAAEIYGVTHTRSIY
QKAIEVLPDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGTFWQTWKDFEI
RHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMDDMKLL
EHRAEQLAAEAERDQPSRSQGKILFVRSDASRSELAELAQQANPEEIEIGEEEEGEEDEE
ELQPNEVPLEQQSVPSTVFGSLKDD
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagtcggggaggaagccccaacggaggcaaagctgaagactcgacctgagagg
cccgacctcttcttcgaagaggaggatttacagtatgaagaggaaatccttcgcaaccct
ttctctgttaagtgttggttccgatacatcgaattcaagcagagtgcatcacaggctgtg
ctcaatctgctctatgaacgggccctcaaggagctacctggaagttacaaactatggtac
cactacctgaaagcccgccgggcccaggtgaagcgtcgttgcgtgactgatcccgcctat
gaggatgtcaacaactgccacgagcgggccttggtctttatgcacaagatgccgcgtctg
tggttagattattgccagttcttgatggagcaaggccgtattactcggacccggcgcacc
ttcgaccgtgccctgagggctctgcccatcactcagcactcacgtatctggcccctctat
ctccgctttgtacgttcccaccctctgcctgagactgcagtgcgtgtataccgccgcttc
ctcaagctgagccctgagagtgcagaagaatatatcgagtatctacgctccatcgaccgg
ctggatgaggcagctcagcgcctggcaactgtggtcaatgatgaaagatttgtctccaag
gaaggaaagtccaactatcagctatggcatgaactgtgtgacctgatctcccagaatccg
gacaaagtgcagtccttaaatgtgggtgccatcatccgagggggcctcacccgcttcact
gaccagcttggcaagctctggtgctcactggccgactactatatccgaagtggacatttt
gagaaggcccgtgacgtatatgaagaggcgatccagacggtgatgactgtacgagacttc
acacaggtgttcgacagttatgcccagtttgaggagagcatgattgcagccaagatggag
acaacttcagagttggggcgggaggaagaagatgacgtggacctggaactacgtttggca
cgctttgaacagctcatcagccgccgaccccttctccttaacagtgtcctactacgtcag
aacccacaccatgtgcacgagtggcacaagcgagtagccctgcatcagggccgacccaga
gaggtcatcaacacatacacagaagctgtgcagactgtggatcccttcaaggccacaggc
aaaccccacacactgtgggtcgcctttgccaagttctatgaggagaacgagcagctggaa
gatgcccgcaccatcctggagaaggcaaccaaagtgaacttcaagcaagtcgaggatttg
gccagtgtgtggtgtgagtatggagagatggagctgagacacgacaactacgaccaggcc
ctgcggctgctgcggaaggccactgccctgcctgcccgccgagctgagtactttgacagt
tctgaacctgtgcagaatcgggtctacaagtccctgaaggtctggtctatgctggctgac
cttgaggaaagtctgggcaccttccagtccaccaaggctgtgtatgagcggatcttggac
ttgcgcatcgctaccccccagattgtcatcaactatgccatgttcctggaagagcacagc
tactttgaggagagtttcaaggcctatgagcggggcatctcattgttcaagtggcccaac
gtgtcagacatctggagcacgtaccttaccaagttcatcactcgttatggaggccgcaag
ctggagcgggcccgggacctgtttgagcaggcgctggatggctgtcccccaaaatatgcc
aaaactctctacctgttatatgcccgactggaggaagagtggggactggcccgtcacgcc
atggctgtgtacgagcgtgccacccttgctgtggagccctcccagcaacatgaaatgttc
aacatctacatcaaacgtgctgccgagatctatggggtcactcacacgcgcagcatctat
cagaaagccattgaggtgctgccggatgagcacgcacgagaaatgtgtcttcgttttgcc
gatatggaatgtaaactgggagagattgaccgagcccgggccatctacagcttctgctcc
cagatctgtgatcctcggacgaccggaacattctggcagacatggaaggacttcgagatc
cggcatggaaatgaagataccatccgtgagatgcttcggatccggcgaagtgttcaggcc
acatacaacacacaagtcaacttcatggcctcgcagatgctgaaggtgtacagcaatgcc
acaggcaccgtgtctgaccttgcccctggacagagcggaatggatgacatgaagctactg
gagcatcgggcagaacagctggcagcagaagcagaacgggaccagccctcgcgctcacag
ggcaagatcctctttgtcaggagtgacgcctcccgctctgagctggctgaactggcccag
caggccaaccctgaggagattgagataggggaggaggaagagggagaggaggacgaggag
gagctgcaacccaatgaggtcccactggagcaacagagcgtgccatccactgtcttcggg
agcctgaaagacgactga
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