KEGG   Macrotis lagotis (bilby): 141501486
Entry
141501486         CDS       T11097                                 
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
mlao  Macrotis lagotis (bilby)
Pathway
mlao01524  Platinum drug resistance
mlao03430  Mismatch repair
mlao05200  Pathways in cancer
mlao05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mlao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    141501486 (MSH6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    141501486 (MSH6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    141501486 (MSH6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    141501486 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlao03400]
    141501486 (MSH6)
DNA repair and recombination proteins [BR:mlao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     141501486 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP
Other DBs
NCBI-GeneID: 141501486
NCBI-ProteinID: XP_074061555
LinkDB
Position
1:100024754..100052379
AA seq 1385 aa
MSRQSTLFSFFPKSPTLCSNNKASAIAADASGAGAAGAGAAGADAARGPEAQRSPAPAAA
APAAPSPSPRSSSGVAPLPREIKLNGGPRRRAPGTPAPAPAPARAPAGSPTSSCDFSPGD
LVWAKMEGYPWWPCLVYNHPTEGTFIRERGKTFRVHVQFFDDNPVRGWVNKRLVKPYTGS
KCKEAQKGGPFYTAKPEILRAMQLADDAISIEKNKRLELAVCDEPSDPDEEEMEVAVASA
SDNSGEDLESEEEVRPKRQIAKRSTARNKKRRVVSDSESDIGGSDVEFKPDTKEEGSSDE
ASSGMGESDSDMDSPAKAAPKRKRGPTVNSSLKRKSLGGCAPNVPKRVVGVSSETKNTLS
SFSAPQNFESQTHVSGSGDGSCGSTQWYHETLEWLKEGKRKDACRRRPDHPDYDPNSLHV
PEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYHMDAIIGVNELGLVFMKGNWAH
SGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKLAHISRFDKVVRREICRIIT
KGTQTYSVLDGEPSESNNKYLLCVKEKEEEASGHMRLYGVCFIDTSVGKFYMGQFSDDRH
CSRFRTLVAHYTPAQILFEKGNLSAETRKVLKGSLSSSIQESLTPGSQFWDAAKTLRTLH
EEGYFKEKLNVDDGVVLPPVLKSMTSESDTIGLTPNDKSELALSALGGCVFYLKKCLIDY
ELLSMANFEEYIPVDADMVKAVKPGAIFAKRDGRMVLDAVTLSNLEILQNAGNGSTEGTL
LERIDTCCTPFGKRLLKQWLCAPLCNPSSINDRLDAMEDLMSVPDKISEVVDLLKKLPDL
ERLLNKIHSVGSPLKSQKHPDSRAIMYEETTYSKKKIVDFLSALEGFKVMCKITGIMEEV
VDNFKSKILKQVITLRTQNTGGRFPELSTELNRWDTAFDHEKARKTGIITPKTGFDSDYD
QALADIKDNEQSLLDYLEKQRKRIGCRSIVYWGVGKNRYQLEIPESFTLHDLPGEYELKS
TKKGCKRYWTKDIEKKLADLMNAEERRDVSLKDCMRRLFFNFDKNYRDWQTAVECIAVFD
VLLCLANYSRGGDGHMCRPVILIPDEDIQPFLKLKGSRHPCITNNFFGDDFIPNDIIIGC
KEEDSEDSTWDAYCVLVTGPNMGGKSTLMRQAGLLVIMAQMGCYVPAEVCSFTPVDRVFT
RLGASDRIMSGESTFFVEMNETASILQHATEHSLVLMDELGRGTATFDGTAIANAVVKEL
AETIKCRTLFSTHYHSLVEDYSQNVAVCLGHMACMVENECEDPSQETITFLYKFTKGACP
KSYGFNAARLACLPEEIIQKGHRKAKEFEKMTQSLRLFREVCLALENSAADVQAVRKLLT
LIKEI
NT seq 4158 nt   +upstreamnt  +downstreamnt
atgtcgcggcagagcaccctcttcagcttcttccccaagagcccgacgctgtgcagcaac
aacaaggcctccgccattgctgcggatgcaagcggcgccggggccgcgggggccggggcg
gccggggccgacgcggcccggggccccgaggcccagcggagccctgcccccgccgccgcc
gccccggcggcccccagccccagcccccgctccagctccggggtcgccccgctgccccgg
gagatcaagctgaacggaggcccgcgccggcgagcgccgggcacgccggccccggccccg
gccccggcccgcgcccccgcgggctctcctaccagctcttgtgatttctctcctggtgat
ttggtttgggccaagatggaaggttacccttggtggccttgccttgtatataaccatccc
actgaaggaacattcatcagagaaagggggaaaactttccgtgtccatgtacaatttttt
gatgacaatccagtgaggggctgggttaataaaaggcttgtgaagccatatacaggttca
aaatgtaaggaagcccagaaaggaggtcctttttatactgcaaagcctgaaatactcaga
gcaatgcaactggcagatgatgctataagtatagagaagaataagcgactggaattagca
gtgtgtgatgaaccttcagatccagacgaggaggagatggaggtagctgttgcttccgca
tcagataatagtggagaggatctagagagtgaagaggaagtgagacccaaaaggcagatt
gctaagcgtagcacagctcggaacaaaaaacggagagttgtttcagactcagagagtgac
attggtggttctgatgtagaatttaagccagataccaaggaagaagggagcagtgatgaa
gcaagcagtggaatgggtgaaagtgatagtgacatggacagtcccgccaaagctgcccca
aaacggaagaggggacctactgtgaatagttccctcaagaggaaaagcttgggaggttgt
gctcctaatgtacctaaacgagtagtaggagtttcgtcagaaacaaagaatacattgagt
tctttctctgctccacagaactttgagtcccaaacccatgtgagtggaagtggtgatggg
agttgtggctcaactcagtggtaccatgaaactctagaatggttaaaggagggaaagagg
aaagatgcgtgtaggaggcggccagatcatcctgattacgacccaaacagtctccatgtc
cctgaggatttccttaatacctgtactccaggaatgagaaggtggtggcagatcaagtct
cagaacttcgacctagtgatcttctataaagtggggaagttctatgagttataccacatg
gatgcaatcattggggtcaatgagctggggctggtgtttatgaaaggcaattgggcccat
tcaggtttcccagaaattgcatttggtagatattcagattccttagttcagaagggttac
aaagttgctcgagttgagcagacagagacccctgagatgatggaagctcgctgccgaaag
ttggctcacatatccagattcgacaaggtggtgcggagagagatatgccgaattattacc
aagggaacacagacttacagtgtgctggatggtgaaccttcggaaagcaacaataaatat
ctgctgtgtgtcaaagaaaaagaagaggaagcttctggtcacatgcgtttgtatggtgtt
tgctttattgacacctctgtgggcaaattttatatgggtcaattttcagatgatcgtcat
tgctcccgatttaggactctggtggcacattacactcctgcacagatattgtttgagaaa
ggaaatctctctgctgaaacaaggaaagtcctgaagggttctttatcttcttccattcag
gaaagtctgacaccgggctctcagttttgggatgcagccaaaaccttgagaacacttcat
gaagaaggatactttaaagaaaagctaaatgtggacgatggggtggtgttaccccctgta
cttaaaagcatgacatcagagtctgacaccattggcttaacacctaatgataagagtgag
ctggcattgtctgctttgggtggttgtgtattctacctcaaaaaatgccttatagattat
gaacttttgtctatggccaattttgaagaatacattcctgttgatgctgatatggtaaaa
gctgtgaagcctggtgctatctttgctaagagagatggtcgaatggtgctggatgctgtg
accctgagcaatctggagattctccagaatgcaggaaatggctccacggaagggacactg
ttagagaggattgatacttgctgtactccctttgggaagcggctcttaaagcaatggctc
tgtgctccactttgtaacccatcttcaatcaatgaccgtttagatgcgatggaagatctc
atgtctgtgcctgacaaaattagtgaagtagttgaccttctgaagaaacttccagacctt
gagagactattgaacaagattcatagtgttggctctccattaaagagtcagaagcaccca
gacagcagagctataatgtatgaagaaaccacttacagcaaaaaaaagattgttgatttc
ttgtctgctctggaaggattcaaagtgatgtgcaaaattactggaattatggaagaagta
gtagataatttcaagtccaaaatccttaagcaagtaattacactccggacccagaataca
gggggtcgtttccctgaattgagcacagaattgaaccgatgggatacagcctttgatcat
gaaaaagctcgaaagactggaataattactcccaaaacaggatttgactctgattatgac
caagcattggctgacatcaaggataatgagcagagcctcttagactatttagagaaacaa
cgcaaacggattggctgcaggtccatagtctactggggtgttggcaaaaatcgctaccaa
ctggaaattccagaaagtttcacattgcacgatttgccaggggaatatgaactgaagtcc
accaagaagggctgtaaacgatactggacaaaggacattgagaagaagcttgctgatctg
atgaatgctgaggagcggagagatgtatcactgaaggactgtatgagaaggctcttcttt
aattttgataaaaattatagggactggcagactgctgtggagtgcattgccgtgtttgat
gtcttattatgcttggctaactatagtcgaggtggtgatggtcatatgtgtcgtccagta
atcctaataccagatgaggatattcaacccttcttgaagcttaaaggatctcgacatcca
tgcataacaaataatttttttggtgatgactttattcctaatgacattataataggctgt
aaggaagaagattcagaagatagtacttgggatgcttattgtgtgctggttactggacca
aatatggggggcaaatcaaccctcatgagacaggctggtcttttggttataatggctcag
atgggttgttatgttcctgctgaagtttgtagtttcacacctgttgatagagtgttcact
agattaggtgcttcagacagaataatgtcaggtgaaagtaccttttttgttgaaatgaat
gagactgccagcatcctacagcatgcaacagaacattccttggtgctcatggatgaatta
ggtagaggcactgcaacttttgatggtacagctatagccaatgcagttgttaaagaactt
gccgagaccataaagtgtcgcactttattttctacacactaccattcattagtagaggat
tactcccaaaatgttgctgtgtgcctaggacacatggcatgcatggttgaaaatgaatgt
gaagacccaagccaggaaaccatcaccttcctttataaatttactaaaggtgcttgccct
aaaagctatggattcaatgcagcacggcttgcctgtcttcctgaagagattattcagaaa
ggccataggaaagcaaaagaatttgagaagatgacccaatcattgagactatttcgggaa
gtttgcctggctcttgaaaattcagctgcagatgtccaggccgttcgcaagttgttgact
ttgatcaaggaaatataa

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