Macrotis lagotis (bilby): 141505469
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Entry
141505469 CDS
T11097
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlao03036
]
141505469 (CHD9)
Chromosome and associated proteins [BR:
mlao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141505469 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
141505469
NCBI-ProteinID:
XP_074067421
LinkDB
All DBs
Position
1:complement(303649133..303892284)
Genome browser
AA seq
2921 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEDLSDDAFVQPGPVSLVDELNLGVEFEPLHIDSLNHVQDTQ
TPQKMTDFEQLNQFESLKLHQVNQSFNSPVENVLSPHSQFNCSPVHPPNQSNGLFPDVAD
GSPMWGHQTSVSNQNGSPFHQGHSHSMQQNKSFVAHPDFALFQVSEQQQQCTSLQSQQNR
NGNNPGQETLSQSKNFMEVNISSPHRVHVTHPSQITSASTSQQPLSMQQFSPTSNASVHF
CGSHQDGNFSGQSPNMTPCSVNNSQQFSSHYSFSSNHISPSSLLQSSTALASSHSTHTLS
DFTGSNAFIAQTGTKQESTPHLLNSNSSLNSNNFEMLHSAHPQGNFSSKLSPVHMNFPDP
VGSASHMGHFNDHVETNGFSSLEDNLLHQVGSQTETFTGLDPEDLLQEDLLPQFDDSAFG
QDSSSHVLEHDLDQQLTPQLLTQPPDMTRTHSQTQVHSWHLSVSNHQHLHDREHSSLQHQ
PPSSKKIDGSGTYAKLQNTQVRAMSEKKQKRKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPSVSTEGKEEKKGRRMKSKPKDKESKKTKTCSSTKVKEKTKIGKLIITLG
KKQKRKNMSSDEMSDVEQISQRPFKDEDSQLLIHWRVVAQGSWAAARVEKRRSNRQVKRK
KYAEDAEGKQSEEEAKVSVKIKKSAASLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKK
EISSGMMIDSEEFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADM
EEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEE
FEQLQASRPDLRHLDRPPPSTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCIL
ADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSLV
SRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLK
NKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKT
EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSK
GAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPEFHLQAMIQSAGK
LVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDR
FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKV
YRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGA
IMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFW
QKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRP
CDRSSGYGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRALLAYCLVHY
RGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLR
KYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDVWVP
EPDHSEVPAEWWDLDADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQR
ANDYMDGDVEDPEYKPAPAMFKDDLEDDVSSPGDLIIADGDGQMMEGDKIYWPTQSALTT
RLRRLITAYQRTSKNRQVQQIQPAFSVQANVMQPPYEEAALNPKIAAKIERQQRWTRREE
ADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSK
EELVDPSIFIQPITEERASRTLYRIELLRKVREQALRHLQLFERLKLCQPNPDLPVWWEC
GTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQNKVAHSRTSTPLIQQYQMAL
SASPLASQPRLLDTKGNAIEDTKVKSESFKEEPQSSGEESVSSEEIRRGIKSEPLSPKNG
VLPQTTGEQKSTGKVETDRRMVAARTEPLTPNPASKKQRVPKRGSESSSDSDSDSDRSSC
SSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEESDSEEEA
QKRAEGTTHMKSYDEESVASLSTIQDETQDSFQMNNGTPNSAYVLQGGYMLAASYWPKDR
VMINRLDSICQTVLKGKWPSARRGYEGNTVASFYTTKLLDSPGAAADVGETRVPTPSSIG
AREDHDQSTQMSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFENEDGSLGQQQY
LARLRELQNASETSLVNFPKAMPVSVSVCSGTSSQPAIGANGVILDNQPIVKKRRGRRKN
VEDVDILLLNRNKPPNHVTVGITTSQITPGINPAVSYTQSQGILDIENPVPVINLKDGTR
LAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTG
EERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMHDRI
LTGPVVREEVSRRGRRPKSEIAKATAAAAAATAANMSSNPLLANGLLPGVDLTTLQALQQ
NLQNLQSLQVTAGLMGMPASLSGGEVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPAES
VAEEKKGNDSKEPDGRKERTESQNSDSVGENSVSSSPSTSSSAALNTAAAGNPLALNPLL
LSNILYPGMLLTPGLNLHIPALSQSNIFDVQNNKNSDLDSTKPVEEKEEDSMVREQEEKG
ETEPSSLNENSTDEGSEKADASSGSESTSSSSEESDSSNED
NT seq
8766 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggacttttttgacgatgccaatctttttggtgagaccttagag
gatttgtcagatgatgcctttgtacaaccaggacctgtttcacttgttgatgaattgaac
ttgggcgtagaatttgaacctttgcacatagattcattgaaccatgtccaggatactcaa
acaccacagaagatgactgattttgagcagttaaatcagtttgagtcactgaaacttcat
caagttaatcagtcattcaatagcccagttgaaaatgtactatcaccacattctcaattt
aattgttccccagtccatcccccaaaccaatctaatggtttatttccagatgtagctgat
ggcagtccaatgtggggccatcagactagtgtttccaatcaaaatgggtctccttttcac
caaggacattcacattctatgcagcaaaataaaagctttgtagcacaccctgactttgcc
ttatttcaggttagtgaacaacagcaacagtgtacatcattacagtcacaacaaaataga
aatggtaataacccagggcaagaaactttaagccaatctaaaaactttatggaggttaat
atttctagtccacatagagtccatgttactcacccatctcagattaccagtgcatcaact
tcacaacaacctctctccatgcagcagttttctccaacatcaaatgcttcagtgcatttc
tgtggcagtcaccaagatgggaattttagtggacagtctccaaatatgactccttgttcg
gttaataattcacaacagttttcttcacattattccttctccagtaatcacatatctccg
agcagtcttcttcagtcctctacagctcttgcatctagtcattcaactcatactttatct
gattttactggaagcaatgctttcatagctcagacagggaccaagcaggaatctacccct
catctcttaaactcaaattcatctttgaattcaaataattttgaaatgttgcattcagca
catcctcagggtaacttcagctcaaaattatctcctgtgcacatgaatttcccagatcct
gttggttctgcttctcacatgggacatttcaatgatcacgtagaaacaaatggtttttca
tctcttgaagataatttacttcatcaagtagggtctcaaactgagactttcacaggactt
gatccagaagatcttcttcaagaggatctccttcctcaatttgatgattcagcatttggg
caagatagttcaagtcatgtcttagaacatgaccttgatcaacaacttaccccacaactt
ttaacacaacctccggatatgactcgaactcattctcagactcaagttcactcatggcat
ttgtcagtttctaatcatcagcacttacatgacagagagcattcatccttacaacaccag
cctccttcctctaagaaaattgatggttctgggacatatgctaaattacagaatacccag
gtgagagccatgtctgagaagaagcagaaaagaaaggtggaatcagagagcaagcaagaa
aaggctaatcgtataatatcagaggcaatagcgaaagcaaaggaacgaggggaacgaaac
attcctcgagtaatgagccctgaaaactttcctagtgtttcaactgaaggaaaggaagaa
aaaaaaggtagaagaatgaaatctaagccaaaagacaaggaaagcaagaaaacaaaaact
tgttcctcaaccaaggtgaaagaaaagacaaaaattgggaagctcattatcacattgggt
aagaagcaaaaaagaaagaatatgtcttcggatgaaatgtctgatgttgagcagatttca
cagcgtccatttaaagatgaggattctcagcttcttatccattggagagtagtggctcaa
ggctcctgggctgctgcaagagttgagaagagaagatcgaatcgtcaggttaaaaggaaa
aaatatgctgaagatgccgaaggaaaacagtcagaagaagaagcaaaagtttctgtgaaa
atcaaaaaaagtgcagcatctttacctgctgaacaacctttgcagttatttgtggaaaat
ccaagtgaagaagatgctgcaattgtggacaaaatactctcttctagaatagtaaagaaa
gaaatatcatctggaatgatgattgactcagaagaattttttgtaaaatacaagaattac
tcctatcttcactgtgagtgggccacagaagaacaacttttgaaagataaaagaatacaa
cagaaaatcaaaaggttcaaattgagacaagcacaacgagcacatttttttgcagatatg
gaggaagagccttttaacccggactatgtagaagtagacagagtgttagaagtttctttt
tgtgaagataaagacactggtgagcctgtaatttactatttggtaaaatggtgctcattg
ccatatgaagatagtacctgggaactgaaagaggatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcctcgaggcctgatttgaggcatttggaccgtcctcctcctagc
acttggaaaaaaatagaacaatccagagaatacaaaaatggcaatcaactcagggaatat
caactagaaggcctcaactggctcttgtttaattggtacaatagacgaaactgcatttta
gctgatgaaatgggtcttggcaaaacaattcaatcaattacattcctctacgaaatactt
ctgaccggtatacgggggccttttctgatcattgcaccgctttcaactattacaaactgg
gagagagaatttcgcacatggactgatcttaatgttgtggtatatcatgggagcctggtt
agcaggcagatgatacagcaatatgagatgtacttcagggactcacaggggcgtattatt
agaggagcatacaggttccaggccataatcaccacatttgaaatgattctgggaggctgt
ggagagctcaatgcaattgaatggcgatgtgtgattattgatgaagcacataggttaaag
aataaaaattgcaaactcctagaaggtctgaaactcatgaatctggaacacaaggtgctt
ttgactggtacaccacttcagaatactgttgaagaactattcagtcttcttcatttcctt
gaacccttacgatttccctctgaatctactttcatgcaagaatttggagatctaaaaaca
gaagaacaggtgcaaaagcttcaagccattttaaaaccgatgatgttgagaagattaaaa
gaagatgtagaaaagaagttggcccctaaggaggaaaccataattgaagtagagcttact
aatattcagaagaaatattaccgagctatcttggaaaagaattttgcatttttatccaaa
ggagctggacaagctaatgtacctaatttagttaacactatgatggaactcagaaaatgc
tgtaaccacccttatcttatcaaaggtgcagaggagaaaatacttggggaatttaaagaa
acacataacccagctgctcctgaatttcatcttcaagcaatgatacagtctgctggcaaa
ttggtcctcattgataaacttctcccaaaaatgaaagcaggtgggcataaagtgctcatc
ttctctcagatggtgcgctgccttgatattttggaggactatcttattcataagaggtat
ctgtatgaaagaattgatggaagagtccgaggaaatcttcgacaggctgccatagatcgg
tttagtaaacctgattcagacagatttgtatttcttttgtgcactcgagctggtggactg
ggcattaatttaactgcagctgatacatgcatcatttttgattctgactggaatcctcaa
aatgacctccaggctcaagctcgttgtcacaggattggtcaaaacaaagcagtcaaagtc
tacagattaataactcgtaactcatatgagagagagatgttcgaccgggcaagtctgaaa
ttaggtctagataaggctgtgttacagagcatgagtggaagagaaaatagtgttggtggt
attcagcaactgtctaaaaaggaaatagaagatctacttcgaaggggtgcctatggtgcc
attatggatgaagaagatgagggttctaaattttgtgaagaagatattgatcaaatttta
cagcgtcgcacaaaaacaatcacaattgaatcagaaggaagaggttcaacctttgctaag
gcaagttttgtggcttctggaaaccgtactgatatttccttagatgatcccaacttctgg
cagaaatgggcaaagaaagcagaaattgatatagatgccatcagtggcagaaacagctta
gttattgatacaccaaggattagaaaacaaacaagaccctttagcgccacaaaagatgaa
ttggctgaattgtctgaagttgaaagcgaaggagatgataaacccaaacttcgtagacca
tgtgaccgttccagtggctatggaaggacagaatgctttcgcgtggagaaaaatctgcta
gtttatgggtggggtcgatggagagagattctagctcatggccgatttaaaagacaatta
aatgaacaagatgtggagatcatttgccgagcccttttagcatattgccttgtccactac
cgaggagatgagaagattaagggtttcatatgggatctcattaccccgacagaggatgga
cagacaagagaattgcaaaatcatctaggcctgtcagctcctgttcccaggggccgaaaa
ggaaagaaagtgaaaactcaagcgagtacatttgatatccataaagcggaatggcttcgg
aaatataatcctgaacatttgctacaagatgaaggctataaaaaacacataaaacatcac
tgtaataaggttttgcttcgagtacggatgctgtattatttaaaacaagaagttattggt
aatgagttccagaaagtatttgatggagttgaagcaagtgacattgatgtttgggtccct
gagccagaccattctgaagtccctgctgagtggtgggatcttgatgccgataaatctctc
cttattggagtttttaaacatggttatgaaaagtacaacacaatcagagcagacccagca
ttgtgtttcttggaacgagtaggaaaacctgatgagaaagcagttgctgctgaacagaga
gcaaatgattacatggatggggatgtggaagacccagaatataaaccagctccagctatg
tttaaagatgacttagaggatgatgtttcatcaccaggagatcttataatagcagatgga
gatggccaaatgatggaaggagacaagatctattggcctactcagtctgccttaaccaca
cgcttgcgtcgcctcataactgcatatcagcggactagtaaaaacagacaagtccaacaa
attcagccagcattttcagtacaggccaatgtgatgcagcctccttatgaagaagctgct
cttaaccctaaaatagctgccaaaattgaaagacagcagagatggacaagaagagaagaa
gctgacttttatagagttgtgtctacttttggagtggtatttgatcctgacagaggacaa
tttgactggacaaaatttagagccatggctagactgcacaagaaaactgatgatagtttg
gagaaatacttatatgcttttatgtccatgtgcaggagagtttgccgccttccttccaaa
gaagaattggtggacccaagtatttttatccaacccatcacagaggaacgtgcttctaga
actttgtatcgaattgagcttctgaggaaagtacgagaacaggctctccgacatctgcaa
ctatttgaacgcttaaaactttgccagccaaacccagatttgccagtctggtgggaatgt
ggcactcatgacagagatttgcttattggagctgctaagcatggagttagtaggacagac
tatcacattcttcgtgatcctgaactttcatttatggcagctcagaggaattatagtcaa
aataaagtggctcattcaaggacttctactccacttatacagcagtatcaaatggcactg
tctgcttctcctctggcttctcaaccaaggttactggatactaaaggcaatgctattgag
gatacaaaagttaaaagtgaaagctttaaggaggagcctcagtcttctggagaagaatct
gtatcctctgaagaaatcagaagaggaataaaatctgaacctttaagcccaaagaatggt
gttttgccacagacaactggagagcagaagtctactgggaaagttgaaacagacaggcgc
atggttgccgccaggacagagcccctaaccccaaacccagcttccaagaaacagcgagtg
cccaaaaggggatctgaatccagctctgattcagactctgattctgatagatcatcttgt
tcttctcgatcatcatcttcctcctcttcttcttcttcctcttgttctcactctagatca
ggatctagttcgtcatcatcttcttcttgttcttcagcatcttcttcatcctcctcttcc
tcttcttcttcctcctcttcttcatcctcatctgaagaaagtgatagtgaagaagaagca
caaaagcgagcagaaggcaccacccacatgaaatcatatgatgaggagagtgttgcatca
ctaagcactatacaagatgagacgcaagatagttttcagatgaacaacggaacaccaaat
tctgcttacgttttacaaggtggatacatgctagctgcttcttattggccaaaggatcgg
gtaatgatcaatcgattagacagcatttgtcaaacggtcctgaaaggaaagtggccatca
gcccggagaggttatgagggcaacacagtggcatcattctacaccaccaagcttctggat
agccccggtgctgctgcagatgttggcgaaacccgcgtgccgactccctcaagtataggg
gcgagagaagaccatgaccagtccacacagatgtcaaaggtgaagaagcatgtacgagaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacatttcaaaagcaa
ggactttctcagaaaaggccgtttgaaaatgaagatggttctcttggacagcagcaatac
ctggcacggcttcgggaacttcagaatgcttcagagacaagcctagtcaattttccaaag
gccatgccagtatcagtctcagtttgctcaggtacttctagtcagccagcaattggtgcc
aatggagtgatattagataatcagcccatagttaaaaaaaggaggggaagaaggaagaat
gtggaagatgttgacattctcttattaaatagaaataaaccacctaatcatgttacagta
ggcattaccacctcacaaattactccagggataaatccagcagtgtcttatactcaatct
caagggatacttgatatagaaaatccagttccagttattaatctgaaagatgggacaaga
cttgccggtgatgatgcacccaaaaggaaggatttagaaaaatggcttaaggagcatcca
ggttatgtggaagatttaggagcctttattcctagaatgcagcttcatgatgggagacct
aagcaaaaaagacatcgctgcagaaaccccaacaaactagatgttaatagtctcactgga
gaagaacgtgttcagttgattaacagaagaaatgccagaaaggtaggaggagcatttgct
cctcctttgaaagatttatgtagattcttgaaagaaaattctgaatatggagtcgctcct
gaatggggagatgttgttaagcagtctggatttcttcctgaaagcatgcatgaccgtatt
cttactggtcctgttgtacgagaagaagtaagcagaaggggcagacggcctaaaagtgaa
attgccaaggcaacagcagcagcagcagctgcaacagcagcaaatatgtctagcaatcct
ttgctagccaatggattgctcccaggtgtggatctgacaactcttcaggccttacaacaa
aaccttcaaaaccttcagtcactacaagtaactgcagggttgatggggatgcctgccagt
ctgtctggtggagaagttaataaaaatatggctgctatgttcccaatgcttctgtcaggg
atgacaggattgccaaatttactgggtatgggaggactcctgacaaaacctgcagaatct
gtggcagaagagaaaaagggcaatgactccaaggagccagatggaagaaaagaaaggaca
gaaagccaaaactctgacagtgttggggaaaactctgtatcgagttctccttcaacatcc
tcttctgctgcattaaatactgctgcagctggcaaccccttagctcttaacccattactt
ttgtccaatatactttatccagggatgcttctcactccaggccttaatcttcatatccca
gctttgtcccagtccaatatttttgatgtacagaacaacaaaaacagtgacctagactca
accaagcctgtagaggaaaaggaggaagattccatggttagagaacaggaagaaaaaggg
gaaactgaaccaagttctctcaatgaaaacagcacagatgaaggttcagaaaaagcagat
gcttcatctggatctgagagtacatcatcatcatctgaggagtcagattctagtaatgaa
gactga
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integrated database retrieval system
