Macrotis lagotis (bilby): 141505639
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Entry
141505639 CDS
T11097
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlao03000
]
141505639 (RC3H2)
04121 Ubiquitin system [BR:
mlao04121
]
141505639 (RC3H2)
Transcription factors [BR:
mlao03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
141505639 (RC3H2)
Ubiquitin system [BR:
mlao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141505639 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
141505639
NCBI-ProteinID:
XP_074067735
LinkDB
All DBs
Position
1:329358684..329417583
Genome browser
AA seq
1211 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHDTPQPQPNSKYKTSMCRDLR
QQGGCPRGSNCTFAHSQEELEKDIIFPLRTALAAPPKFWYRLRNKKIAATVRTFPLLNKV
GVNNTVTTTAGNVISVIGSTETTGKLVPSTNGISSAENSVSQLIPRGADTTLRALENVKK
VGKVVSSGQNISGTSAESITENKIGSPPKTPVSNVAATSAGPPTVGTELNSVPPKSSSFV
TRVPVYPQPSESIQYFPDPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVP
ESSLPPASVPYADHYSTFPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRP
PMYQRDDIIRSNSLPPMDVMHSSVYQTSLRERYSSSLDGYYPVACQPPSEPRTTVPLPRE
PCGHLKTSYEDQLRRKPEQWAQYHTQKASLVSSTLPMATQSPTPPSPLFSVDFRTEFSEN
VTDVRGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVMANSNAVLMDLDSGDVKRRVH
LFETQRRMKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSD
YVPYVNAVDSRWSSYGSDSASSAHYIERDRFIVADLSSHRKHSSTGDLLSIELQQAKSNS
LLLQREANALAMQQKWNSLDEASHLTLNLLSKEMDLRNGENDYTEDTADTKPDRDIELEL
SALDTDEPDGQGEQIEEILDIQLGITSQKDQLLNGTTMENGHPLKQHPKEPVEPKRQSLG
EDHVILEEQKSVLPVTSCFSQPIPASISNASCLPVTTSVSVSNLILKTAHIMSEDKNDFL
KPVANGKMVNS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggctgctcagtggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgaaaatgtgcacaagcccatcagtttaggttgttcacacaccgtctgcaagacc
tgcttaaataaacttcaccgaaaagcatgcccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtaaactttgcacttctccaattagttggagcccaggtaccagat
catcaaacagtaaaattaagtaatctaggagagaataagcactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggagggaagggtgttgctagc
ttgaatcagagtgcactgagccgtcctatgcaaagaaaactggtgactcttgtaaattgt
caacttgtggaagaagaaggtcgtgtaagagccatgcgagcagcacgatcacttggggaa
agaactgtaactgaactgattttacaacaccagaaccctcaacaattgtctgctaatcta
tgggctgctgttagggctcggggatgccaattcttaggaccagctatgcaagaagaggcc
ttgaagttggtattgctggctctggaagatggttctgctctctcaagaaaagttttggta
ctttttgttgtccaaagactggaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcagctactgtatcgtgcttcttgttttaaggtcacaaaaagggatgaagat
tcttctctgatgcaattaaaagaagaatttagaagttatgaagctttgcgaagggagcat
gatgcccagatagttcatattgctatggaggcagggcttcgtatatcaccagaacagtgg
tcttcacttctctatggtgatttggcacataaatcacatatgcagtctatcattgataag
cttcagtctccagaatcctttgcaaagagtgtccaggagttgacaattgttttgcagcgt
acaggtgatccagcaaacctaaaccgattgaggcctcatttggaacttcttgcaaacatt
gatcctaatccagatgctgtctcaccaacttgggagcagcttgaaaatgcaatggttgct
gtgaagaccgtggttcatggactagtggactttattcagaactatagtcgtaaaggccat
gatacaccacagccgcaaccaaatagcaaatataaaactagtatgtgccgagatctgcga
cagcagggggggtgtccacgaggatcaaattgtacatttgctcattctcaggaagagctt
gaaaaagatataatttttcctctgaggactgctttagctgcacccccaaaattttggtat
cgtttaaggaacaaaaagatcgcagcaactgtacgaacatttcctctcctaaataaagtt
ggtgtaaataacactgtcacaaccacagctggaaatgtaatttctgtcataggaagtact
gaaacaactgggaaacttgttccaagtaccaatgggatttcaagtgcagagaacagtgtt
tcccagctaatccctcgtggtgctgataccacattaagagctctggagaatgtgaagaaa
gttgggaaggttgtctccagtggtcagaatatatctgggacttctgcagaatctataact
gaaaataaaattggttctccacccaagactcctgtaagcaatgtagcagctacctcagct
gggccccctactgttggaacagagctgaattctgtgcctccaaaatccagctcatttgta
actagagtacctgtatatcctcagccttctgaaagcattcagtattttccagatccaagg
acccagatatcctttgaagttccacagtatccacagacaggatactacccaccacctcca
acggtaccagctggtgtggctccctgtgttcctcgttttgtgaggtccaataatgttcca
gaatcttccctcccaccggcttccgtgccatatgctgatcattacagtacatttccccct
cgagatcgagtgaattcttctccttaccagcctcctcctccgcagccgtatggaccagtt
cccccagtaccttccggaatgtatgctcctgtgtatgacagccggcgcatctggcgtcca
ccaatgtaccaacgagatgacattattaggagtaattctttacctccgatggatgtgatg
cattcgtctgtctatcagacatctttgcgagaaagatatagtagttccctagatgggtat
tatccagtggcttgtcagccaccaagtgaaccaaggactactgtacctttaccgagggaa
ccttgtggtcatttgaaaaccagttatgaggatcagttaagacgaaaaccagaacagtgg
gcgcaatatcatacccagaaagcatcccttgtttcttcaactcttcctatggcaacacag
tcaccgacaccaccttctcctctattcagtgtagactttcgtactgagttctctgagaat
gtaactgacgtacgtggtacaaaatttgaggaagatcatctttcccattattcaccctgg
tcctgtggcaccataggttcttgtataaatgccattgattcagagcccaaggatgtaatg
gctaattcaaatgctgtgttaatggatttggatagtggagatgttaagagacgagtacat
ttatttgaaacacagagaaggatgaaagaagaagatcctataattccttttagtgatgga
cctattatctcaaaatggggtgcaatttccagatcttcccggacaggttaccataccacc
gatcctatacaggccactgcttcccaaggaagtgctactaaacccatcagtgtatcagat
tatgttccctacgtcaatgctgttgattcaaggtggagttcatatggctctgattctgct
tcttcagcacattatatagaacgggatagatttattgttgctgatttatctagtcataga
aagcattccagtactggagatcttctaagcattgaacttcagcaggcaaagagcaactca
ttgttgcttcagagggaagccaatgcactagccatgcaacagaaatggaattccttggat
gaagccagtcatcttaccttaaatctcctaagcaaggaaatggatttgagaaatggagag
aatgattatacagaagatacagcagatactaagcctgatcgagatattgaattagaactt
tcagcacttgacactgatgaacctgatggacaaggtgaacaaatagaagagattctggac
atacaacttggtatcacttctcaaaaagatcagctactgaatggaactacaatggaaaat
ggccatccactaaagcaacatccaaaggaaccagtagagcccaagaggcaaagtttaggt
gaagaccatgtgattctggaggaacaaaaatcagtcctgccggtaacttcttgcttcagc
cagccaatcccagcatctattagcaatgcaagttgcctgccagtcaccacatctgtcagt
gtcagcaatctcatcttgaaaactgctcatattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatgggaagatggttaacagctga
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