Macrotis lagotis (bilby): 141507595
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Entry
141507595 CDS
T11097
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141507595 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlao03041
]
141507595 (SF3B1)
03036 Chromosome and associated proteins [BR:
mlao03036
]
141507595 (SF3B1)
Spliceosome [BR:
mlao03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141507595 (SF3B1)
Complex B
141507595 (SF3B1)
Complex C
U2 SnRNP specific factors
141507595 (SF3B1)
Chromosome and associated proteins [BR:
mlao03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141507595 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
141507595
NCBI-ProteinID:
XP_074071507
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All DBs
Position
1:654534738..654581986
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AA seq
1157 aa
AA seq
DB search
MNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGASSQPPSKRKRRWDQTADQT
PGATPKKLSNWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAAT
PGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETP
TPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWR
WEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQ
TEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNG
TPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNT
TARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLV
EIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFL
KAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIK
TEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKM
VMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKP
YLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYP
EVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA
EYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
AVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVI
QAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRI
YNDEKNTYIRYELDYIL
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctaggacatatatggatgttatgcgagaacagcatttgactaaagaggagagg
gaaattaggcaacagctagcagaaaaagctaaagctggagaacttaaagttgtcaatggt
gcatcatcccagcctccttcaaaacgcaaaaggcgttgggatcagacagctgatcagact
cctggtgcaactccaaaaaagctctcaaactgggatcaagcagagactcctgggcataca
ccttctttgaggtgggatgagacacctggtcgtgcaaagggtagtgagacacctggagca
acacctggctcaaaaatatgggatcctactcctagtcacaccccagcaggagctgctact
cctgggcgtggtgacacccctggtcatgcaacaccaggccatggaggtgcaacttcaagt
gcacgtaaaaacagatgggatgagacccctaaaactgagagagatacccctggccacgga
agtggatgggctgagactcctcgtacagatcgtggtggagattcaattggtgaaacacca
actcctggagcaagcaaaagaaagtcccgttgggatgaaacaccagctagtcagatgggt
ggaagcactcctgttttgactcccggtaaaacacctattggcacacctgctatgaacatg
gcgacacctactccaggtcacataatgagcatgacccctgaacagcttcaggcatggaga
tgggagagggaaattgatgagagaaatcgtccactttctgatgaagagctggatgccatg
ttcccagaaggatataaggtcctccctcctccagctggttatgttcctattcgtactcca
gctcggaagctgacagcaactcctacacctttaggtggcatgactggattccacatgcaa
actgaagataggactatgaaaagtgttaatgaccaaccatctggaaatcttccattttta
aaacctgatgatattcaatactttgataaactattggtggatgtagatgaatcaacactt
agtccagaagaacaaaaagagagaaaaataatgaaattacttttaaaaatcaagaatggc
acacctccaatgagaaaggcagcattgcgtcaaatcactgacaaagctcgagaatttgga
gctgggcctttgtttaatcagattcttccattgctgatgtctccaacacttgaagatcag
gaacggcacttgctagtaaaagtcattgatagaattttgtacaagttagatgatttggtt
cgaccatatgtacataagatccttgtggttattgaaccactattgattgatgaagattac
tatgccagagtggaaggcagggaaataatttcaaatttggctaaggctgctggcctggca
accatgatttctacaatgcgaccagatattgataacatggatgaatatgtccgtaataca
acagctcgagcttttgctgttgttgcatctgccttgggtattccttcgttgttgcccttc
ttgaaagctgtgtgtaagagcaagaagtcctggcaagctaggcatactggtattaagatt
gtacagcaaattgctattcttatgggttgtgccatcctccctcatctaagaagtttagtt
gaaatcattgagcatggtcttgtggatgaacaacagaaagtccggactattagtgctttg
gctattgctgctttggctgaagcagctactccttatggcattgaatcttttgattctgta
ttaaagcctttgtggaaaggtatccgtcagcacagaggaaagggtttggctgccttctta
aaagccattggatatcttattcctcttatggatgcagaatatgcaaactactatacaaga
gaagtgatgttaatccttatcagagaattccaatctcctgatgaagaaatgaaaaaaatt
gtattgaaggttgtaaagcagtgctgtgggactgatggtgtagaagcaaattacatcaaa
acagagattcttcctccttttttcaaacatttctggcaacacagaatggccttggatcga
agaaattatagacagttagtggataccacagtagagttggcaaacaaagtaggtgcagca
gaaattatttcccggattgtggatgatctgaaagatgaggctgaacaatacagaaaaatg
gtcatggaaactattgagaaaataatggggaacttgggtgcagcagatattgaccacaaa
cttgaagaacaacttattgatggcatcctttatgcctttcaagaacagaccacagaggac
tcggttatgttgaatggttttggcacagtagttaatgctcttggcaaacgagtcaaacca
tatttgcctcagatctgtggtacagttttgtggcgtttgaacaacaaatcagccaaagtc
agacaacaggctgctgatctcatctctcgtactgctgttgttatgaaaacttgtcaggag
gaaaaattgatgggacatttgggtgttgtcctgtatgaatacttgggtgaagaataccct
gaagtattgggaagcatccttggagcactgaaggccattgtgaatgtaataggtatgcac
aagatgactccaccaattaaagatttattgccaaggcttacaccaatcttaaagaatcga
catgagaaagtacaagaaaactgtattgatcttgttggacgtattgctgacaggggagcg
gaatatgtctctgcaagagaatggatgagaatttgctttgaacttttagaattattaaaa
gctcataaaaaagctatccggagagccacagtcaacacatttggttatattgccaaagcc
attggacctcatgatgtcttggctacactgctaaacaacctcaaagttcaagaaagacaa
aatcgagtatgtacaacagtggccatagctatcgtagcagagacatgttcaccattcaca
gtcctgcctgctctgatgaatgaatatcgagttcctgaactgaacgttcaaaatggtgtt
ttaaaatcactttctttcttgtttgaatacattggagaaatgggaaaagattatatttat
gctgtaacaccattacttgaagatgctttgatggacagagatcttgtacacagacagact
gccagtgcagtggtgcagcacatgtctcttggggtttatggatttggttgtgaagattct
cttaatcatttgttgaattatgtatggcctaatgtatttgagacatctccccatgttatt
caagcagttatgggagccctggaaggcctaagagttgctattggaccatgtagaatgttg
caatactgtttgcagggtttgtttcacccagccagaaaagtcagagatgtgtactggaag
atttacaattctatctacattggttcacaggatgcactcatagcacattatccaagaatc
tacaatgatgaaaaaaacacctatattcgttatgaacttgactatatcttataa
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integrated database retrieval system
