Macrotis lagotis (bilby): 141512806
Help
Entry
141512806 CDS
T11097
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlao03000
]
141512806 (RC3H1)
04121 Ubiquitin system [BR:
mlao04121
]
141512806 (RC3H1)
Transcription factors [BR:
mlao03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
141512806 (RC3H1)
Ubiquitin system [BR:
mlao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141512806 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
141512806
NCBI-ProteinID:
XP_074078163
LinkDB
All DBs
Position
2:complement(67144171..67221439)
Genome browser
AA seq
1134 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQDELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSEE
GAVDLPNRKPTALPNGIVSAGSTVTQLIPRGTDSSYDSGLKPGKIDHLSSSAPGSPPDLL
EPGPKNISALPVTPHPVPPRGPTDLPSMQATKPLSMVPRGSQIYSAQQADVFYQDPRGAA
PPFEPAPYPPGMYYTPTPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPTQSYAREEIFQESPVPIEIPPATVSPYIPESRERYQQIEGYYP
VGPHPSQIRAPYIREPYSRLPPPPQAHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPT
LPHSFHPEEYLDDDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDVKPKDAVAAGSVEMT
NVDSKSVRDQRLELQRRVAETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGSGPMQALAA
QGTSTKSISISDYSPYGAHGGWGGSPYSPHQTMPSQGHFTERERLTMSEVASHGKPLPSA
EREQLRLELQQLNHQINQHTQLRGLEAVSNRLLLQRETSTLAGQPPPQPPPPPPKWPGMV
SSEQLSLELHQVEREIGKRTRELSLENQSSLDMKNKLGSSKQAENGQAEPQNKVPAEDLA
LTFSSEVPNGSTLSQENISLLSNKTSSLTLAEDPEGGGDNNDSQRTGVTPSSAP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccgcaatggacggatttcctctcctgcccaatttgcactcagaca
ttcgacgaaacgattcggaagcctatcagcctgggctgtggccacactgtctgcaagatg
tgcctgaataaacttcaccgcaaggcgtgccccttcgaccagaccactattaacactgac
atagagctcctgcctgtgaactcggccttgctgcagttagtgggtgctcaggtccctgag
cagcagcccattactttgtgtagtggggtagaagatacaaaacattatgaagaagcaaag
aaatgtgtagaggaattagcattgtatttgaaaccactcagcagtgcaagaggagtaggt
ctgaatagcaccactcagagtgttctgagccgcccaatgcagaggaaattggtgacgttg
gtccactgccagttagtggaagaagaaggtcggattcgtgccatgagggcagctcgatct
ttaggtgaacgaactgtcacagaactaatccttcagcaccagaatcctcaacaactttcc
tcaaacctttgggcagcagtcagggccaggggctgccagttcctgggaccagcaatgcag
gaggaagccctgaagctggtcctgctggccttagaagatggatctgctttgtctcggaaa
gtcttggttctatttgtggtgcaaagattggagccacgatttcctcaggcctcaaaaacc
agcattggacatgttgttcagctattgtacagagcctcctgtttcaaggtgacaaaacga
gatgaagattcctccttaatgcaattgaaggaggagtttaggacatatgaagctcttcgt
cgggaacatgactcccagatagttcagattgccatggaggcaggcttacgcattgcccca
gaccagtggtcttctcttctgtatggagaccaatcacataaatctcacatgcagtccatt
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaactaaccattgct
cttcagaggactggtgatcctgcaaacctgaaccgcctgagaccccatctggagctctta
gcaaacattgaccctagtccagatgcccctcctccaacctgggaacaattagaaaatggg
ttggttgctgtgcgcacagtggtacatggactggttgactatattcagaatcacagcaag
aaaggaacagaccagcaacagcctcctcagcacagcaagtataaaacttacatgtgccga
gacatgaaacagagaggagggtgcccccgaggggccagctgcacatttgcacactcacag
gatgaattggaaaaattccgtaaaatgaataaacgtctggttcccagaagacccctgagt
gcctccttaggccagctcaatgaagtgggcctaccttcagcagctatcctttcagaagaa
ggggcagtggacctgcccaacagaaagcctactgccctgccgaatgggattgtgtcagca
gggagcacagtgacccagctgatcccccgagggacagactccagctatgactctggtctg
aagccggggaagattgaccacctgagcagcagtgctcctggatcccctcctgacctactg
gaacctggacccaagaacatttctgctttacctgtgactccccatcctgtacctcctagg
ggaccaacagacctaccttctatgcaggccaccaaacctctttccatggtaccacgaggt
tcccagatatactcagcacagcaagcggatgtattttatcaggatcctcgaggggctgct
ccaccttttgagccagcaccttatccaccagggatgtactatactccaaccccacagtgt
gtctcccgctttgtccgacctccaccgtctgctcctgaacctggtccgccctacttggat
cattatccaccctacctccaggatcgtgtagtcaactcccagtatgggactcagccccag
cagtacccacccatgtacccaccacactatgatggccgacgagtataccctactcagtct
tatgcccgagaggagatcttccaggaaagccccgtacccattgagattccacctgcgact
gtttcaccttatataccagagtccagagagagataccagcaaatagagggttactatcca
gtgggaccacatccaagtcagataagagctccatatatcagagaaccttacagtagacta
ccacctcctccccaggctcaccctagtcttgatgagctacatcgacgacggaaggaaatc
atggcccagctagaagaaagaaaagtcatctccccacctccttttgcaccttcaccaact
ttgccccattcattccatccagaagaatatttggatgatgacctgaaagttgctggcaaa
tacaaagggaatgattacagccagtattccccttggtcatgtgataccatcggctcctat
attgggaccaaagatgtgaaacccaaagatgctgttgcagctggcagtgtggagatgaca
aatgtggacagtaaaagtgtgagagatcagcggctagagcttcagcgaagggtagcagaa
actagtgatgatgacctcatcccatttggtgaccgacccacagtgtcccggtttggcgcc
atatctcgaacttccaaaaccatgtatcagggttctggcccaatgcaggctctggcagct
caggggacttccaccaaatcaatcagcatttctgattacagtccatatggagctcatggt
ggctggggaggttctccatattcccctcaccaaactatgccttctcagggacacttcact
gaaagggagagattgaccatgtcagaagtggccagtcacgggaagcccttaccctctgct
gagagagaacaactgagattagagctgcagcagctgaaccaccagattaaccagcacacc
cagcttcgaggactcgaggctgttagtaacagactgctgttgcagagggagaccagcact
ctggcaggccagccccctccccagcctccacccccaccccccaagtggcctggaatggtc
tcaagtgagcagttgagtttggaactccaccaggtggagcgggagattggcaagagaacc
cgggagctgagcctggagaaccaatcttctttggacatgaaaaacaaattgggttccagt
aagcaagcagaaaatggacaagctgaaccacaaaacaaggttccagctgaggaccttgca
ttgacattcagcagtgaggtaccgaatggatcgaccttatcacaagaaaacatcagcctc
ctgtcaaacaagacctcctctctgaccctggctgaggatccagagggagggggagataac
aatgactctcagaggacgggagtcacgcccagctctgctccctga
DBGET
integrated database retrieval system
