Macrotis lagotis (bilby): 141513349
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Entry
141513349 CDS
T11097
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlao04131
]
141513349 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlao04147
]
141513349 (COPA)
Membrane trafficking [BR:
mlao04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
141513349 (COPA)
Exosome [BR:
mlao04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141513349 (COPA)
Exosomal proteins of bladder cancer cells
141513349 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
141513349
NCBI-ProteinID:
XP_074079181
LinkDB
All DBs
Position
2:157615282..157655397
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICSRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKESFDP
EKETIPDIDPNARLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEAAEGFGDEAAAKAQEEGGGWDVEEDLELPPELDVSPGAAG
GTEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKESLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVSQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaatttgagaccaaaagtgctcgagtcaaaggactcagctttcaccccaaa
cgtccctggatcttgactagtcttcacaatggagtcatccagctgtgggattatcgaatg
tgtaccctcattgacaaatttgatgagcatgatggtcctgtaagaggcattgatttccac
aaacagcagccactcttcgtctctggaggagatgattataagatcaaggtctggaattat
aaacttcggcgctgtctcttcacattgcttgggcacctagattatatccgtaccacattt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgtgtctgg
aactggcagtccaggacctgtgtctgtgtgctaacaggacacaaccactatgtgatgtgt
gcccaattccacccttcagaagacctggtggtgtcagcaagcctggaccagactgttcgt
gtttgggatatttctggtctgaggaagaagaatctttcccctggagctgtggagtcagat
gtgaggggaataacaggggttgatctctttggaacaacggatgctgtcgtaaaacatgtt
ttggagggtcatgatcgtggagttaactgggctgccttccaccctactatgcctctcatt
gtgtctggagctgatgatcgtcaagtgaagatttggcgtatgaatgaatctaaggcttgg
gaagtagatacttgccgtggtcactacaacaatgtctcctgtgctgtcttccaccctcgc
caggaactcatcctcagtaattctgaagataaaagtatccgagtgtgggatatgtcaaaa
cggactggagttcagaccttccgtagagaccatgaccgtttctgggttctagctgcccat
cccaacctcaacctttttgctgcaggtcatgatggtggcatgattgtttttaaactagaa
cgggagcgaccagcttatgctgttcatggcaacatgctacattatgtcaaggatagattt
ttgcgccagctagattttaatagctctaaagatgttgctgtcatgcagttgaggagtggt
tccaaatttccagtgttcaacatgtcttataacccagcagaaaatgccgtcctactatgc
acaagagctagcaacctagaaaacagcacctatgacctatataccattcccaaggatgca
gactcgcagaatcctgatgcccctgaagggaaacgttcctctggcctgacagccgtatgg
gttgcccgaaatcgttttgctgtcctggatcgtatgcattcgcttctaatcaagaacttg
aagaatgaaattaccaagaaagtgcaggtccctaattgtgatgagatcttttatgcaggt
actggaaacctgctgcttcgtgatgctgattccataacactttttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaagtgaaatatgtcatttggtcagcagatatg
tcccatgtagccttgctggccaagcatgccattatgatctgcagtcgtaaactggaatca
ctttgtaacattcatgagaatattcgtgtcaagagtggggcctgggatgagagtggtgtg
tttatctatactaccagcaatcacatcaaatatgctgtcactactggggaccatggaatc
atccgtacccttgacttgccaatctatgtcacacgggtgaaaggcaataatgtgtactgc
ctagaccgagagtgtcgtccacgagtgcttaccattgatcccaccgagttcaaattcaag
ctagccttgatcaatcggaaatatgatgaggtactgcacatggtgaggaatgccaaattg
gtgggccagtccatcattgcctatctccagaagaagggctatcctgaggtggcactgcac
tttgttaaggatgagaagactcgatttagtctggccctggaatgtggcaacattgagatt
gccctagaagcagccaaggccctagatgacaagaattgctgggaaaagctaggagaagtg
gccctactccagggaaaccatcagattgtggagatgtgctaccaacgtaccaagaatttt
gataagctttccttcctgtacctcatcactggcaaccttgagaaacttcgtaagatgatg
aaaattgctgaaatccgaaaagatatgagtggtcattaccaaaatgccctgtacctgggt
gatgtttcagaacgtgtgcgcatcctaaagaattgtggtcagaaatccctggcctacctg
acagctgctactcatggtttggatgaagaagcagagagcctcaaggagtcatttgaccca
gagaaggagacaattccagacattgaccctaatgccaggctgcttcagccacctgcaccc
atcatgccattagataccaattggcccctgcttactgtttccaaaggcttctttgagggt
tctattgccagcaagggaaaaggaggtgcactggccgctgacattgacattgatactgtt
ggcactgaaggctggggagaggatgcagagctgcagctggatgaagatggattcgtggaa
gctgcagagggttttggcgacgaagctgctgctaaagcacaggaagaaggaggtggctgg
gatgtagaggaagacctggagctcccacctgaactggatgtttccccgggagcagctgga
ggcactgaagatgggttctttgtgccccccaccaaaggaaccagtcctactcagatctgg
tgcaataattcccagctgccagttgaccacatcctagcaggctcctttgagacagctatg
cggctccttcatgaccaggttggagtaacccaatttggtccctataagcagttatttctc
cagacatatgctagaggccggaccacataccaagctctcccatgcctacccaccatgtac
ggttacccaaatcgcaattggaaggatgcagggctgaagaatggtgtaccagctgtgggg
ctgaagcttaatgacctgatccaacgactgcagctgtgctatcagctcactacagcgggc
aagtttgaggaggcagtggagaaattccgttctattctgcttagtgtgccacttcttgtg
gtggacaataagcaagaaattgctgaggcccagcagctcattgctatctgtcgtgagtac
attgtgggcttgtcaatggaaattgagaggaagaaattgccaaaggagagcctagaacag
cagaagcgcatctgtgagatggcagcttacttcacccactccaatctgcaacctgtgcat
atgatccttgtccttcgtacagctcttaatctcttttttaaactcaagaacttcaagact
gctgctacctttgcacggcgcctgttagagctgggtcccaagcctgaggtgtcccagcag
actcgaaagatcctgtcagcctgtgagaagaatcccacagatgcctaccagctcaattat
gacatgcacaacccttttgacatctgtgctgcatcctaccgacctatttaccgtggcaag
ccagtggaaaagtgtcccctcagtggggcttgctactctcctgagtttcagggccagatt
tgccgtgtcaccacagtgacagaaattggcaaagatgtgattggtttaagaatcagtcct
ctgcagttccgctga
DBGET
integrated database retrieval system