Macrotis lagotis (bilby): 141514026
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Entry
141514026 CDS
T11097
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mlao
Macrotis lagotis (bilby)
Pathway
mlao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141514026 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlao03041
]
141514026 (DDX42)
Enzymes [BR:
mlao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141514026 (DDX42)
Spliceosome [BR:
mlao03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141514026 (DDX42)
Complex B
141514026 (DDX42)
Complex C
U2 SnRNP specific factors
141514026 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
141514026
NCBI-ProteinID:
XP_074080564
LinkDB
All DBs
Position
2:201832012..201875806
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AA seq
939 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAIAAGKKEEPKLPQQSHSAFGATSSSAGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKSADSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGLVQEEEEDN
LEYDSDGNPIAPSKKVIDPLPPIDHSEIDYPPFEKNFYNEHEEITSLSPQQVIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELDPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANADELANNLRQEGHNLGLLHGDMDQSERNKV
ISDFKKKGIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNMEGANQHVTKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENTDRGNNSNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQ
KAGSSAAGASGWTSAGSLNSVPSNSAQQGHANSDSPIATAAKSIPGFASAGNLSSVPGGY
SPTGTQGLNNTASGSNSREGIGGGSGNGNRERYPENRGSSRHSHGDSGNRHGDGPRHGDG
RHGDGYRHPESSGRHGDGHRHGENRHGSGGRHGESRVGSDGRNGESRKEACGRENKTDGR
TDNRTDSRTDSKMDLKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggtggccctggcaccaagaggggatttgggtttggtggatttgcc
attgctgctggaaaaaaagaagaaccgaagctcccacaacagtcccatagtgcctttggg
gcaaccagctcttcagcaggatttggaaagtcagctccaccacagcttccttctttctat
aaaattggatctaagcgagcaaattttgatgaagaaaatgcttattttgaagatgaggaa
gaagattctagcaatgtcgatttgccttatattccggctgaaaattcacctacccgccag
cagttccattccaagtcagcagactctgacagtgatgatgatcccctggaagcattcatg
gctgaagtagaggatcaagcagctcgagacatgaagagacttgaagaaaaggacaaggaa
agaaaaaatgtgaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgatacatggcagaaaaccctactgctggtctggttcaggaagaggaagaagataat
ctggagtatgacagtgatggaaatcccattgcaccatccaaaaaagtcattgatcccctt
cctccaattgatcattcagagattgactatccaccatttgaaaaaaatttctacaatgag
catgaagagataaccagcctttccccacagcaggtgatagatctccgacataaactcaat
cttcgggtctctggtgctgctccacctagaccaggaagcagttttgctcactttggattc
gacgagcagcttatgcatcagattcggaaatcagagtacacacagcctactcccattcag
tgtcagggtgttccagtggctctaagtgggcgagacatgattggcattgccaaaacaggc
agtgggaaaacagcagcctttatctggccaatgctgattcacatcatggatcagaaggaa
ttggatccaggggatggacccattgcagtgattgtatgccctaccagggagctgtgtcag
cagattcatgcagaatgcaagcggtttggaaaagcatacaatcttcgatctgtggccgtt
tatggtggaggaagcatgtgggaacaggccaaagcccttcaagaaggggctgagattgtt
gtctgtaccccaggtcgactgattgatcatgtgaagaagaaagctacaaatctccaaaga
gtctcttatctagtgtttgatgaagctgatcgaatgtttgacatgggttttgagtatcag
gttcgatccatagccagtcatgtccgccccgacagacagactctgttattcagtgcaact
ttccggaaaaagattgaaaaactggccagagacatcctgattgatcctatccgagtggtg
cagggagacattggagaggcaaatgaagatgtgactcagattgtagaaattcttcactct
ggacccagtaaatggaactggctcactcggcgtctggtagaattcacctcttcaggaagt
gttctcttgtttgtaactaagaaagccaatgctgatgaactagctaacaatctcaggcag
gaaggacacaatctggggctgctccatggggacatggatcaaagtgaaagaaacaaggtc
atttcggattttaagaaaaagggcatcccagttcttgtggctacagatgttgcagcccgt
ggtttggacattccttctattaagactgtcatcaactatgatgtggctcgggacatcgac
acccatacacacagaattggccggacaggccgagcgggcgagaagggtgtggcatatact
cttctgactcccaaggacagcaattttgctggtgatcttgtcaggaacatggaaggggcc
aatcaacatgttaccaaggaacttctggacctagcaatgcagaatgcctggtttcggaaa
tctcgattcaaaggagggaaaggaaaaaaactgaacattggtggtggaggccttggctac
agagaaagacctggtctaggttctgagaacacagaccgtggaaacaacagcaatgtgatg
agtaattatgaggcctataagccttccactggggccatgggagaccgcctgactgcaatg
aaagcagctttccagtcgcagtacaagagccattttgttgctgccagtttaagcaatcag
aaggctgggagctctgctgctggggcaagtgggtggaccagtgcagggagtttgaattct
gtcccaagtaattcagcccaacagggccatgccaattctgacagccccattgccacagct
gccaagagcatcccaggctttgccagtgctggtaaccttagcagtgttccaggagggtac
tcacctactggaacccagggtctcaacaacacagcttctgggagcaacagccgagaagga
attggtggtggcagtggtaatgggaatagagagcgatacccagagaaccgaggtagtagt
cgccatagccatggagacagtggtaatcgccatggtgatggtccacgccatggagacggc
cgtcacggtgatggatatcgtcatccagaaagcagtggccggcatggagatggtcaccgg
catggagaaaacagacatgggagtggtggtcgtcatggggaaagccgggttgggagtgat
ggtcggaatggagagagcaggaaagaagcttgtggtcgtgaaaacaagacagacggcagg
acagacaacaggacggacagcaggacggacagcaagatggacttgaagacggataagaca
gcagatggctttgctgtgcctgagccacccaaacgcaagaagagtcgatgggacagttag
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