Macrotis lagotis (bilby): 141518001
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Entry
141518001 CDS
T11097
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03030
DNA replication
mlao03410
Base excision repair
mlao03420
Nucleotide excision repair
mlao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141518001 (RFC1)
03410 Base excision repair
141518001 (RFC1)
03420 Nucleotide excision repair
141518001 (RFC1)
03430 Mismatch repair
141518001 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlao03032
]
141518001 (RFC1)
03400 DNA repair and recombination proteins [BR:
mlao03400
]
141518001 (RFC1)
DNA replication proteins [BR:
mlao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141518001 (RFC1)
DNA repair and recombination proteins [BR:
mlao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141518001 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
BRCT_2
AAA_22
Rad17
RuvB_N
AAA_5
AAA_16
AAA_30
AAA_33
AAA_17
nSTAND3
AAA_7
AAA_18
TCAD2
Motif
Other DBs
NCBI-GeneID:
141518001
NCBI-ProteinID:
XP_074085719
LinkDB
All DBs
Position
3:176273071..176372513
Genome browser
AA seq
1155 aa
AA seq
DB search
MDIRKFFGVVPSGKKLVNEIVKKNENTKTIEGTSKAKKGTKEIKVKNSPKEDDVKRKHGN
KKKRIIYDSDSEPEETVQVKNTQNQSEKLLTSIKPQKIPRQDPVVYVSETDEEDEVIYKK
KSLKPKENGISSSSHIGAPDGKKDIGKKTQIKNKPLSPIKLTPTSVLDYFGTGSVQRSVK
KLVASKRREPSQNTNDSTLTDEAVAEQLQIEENSEIERQLHEDEEFARTLAMLDDEPKNK
KARRNSEEREISSSDQINSSKSEKHKVKTSNFSQESKNYNWNKQTKSEDSKGSPLHSSPS
KVPDKIEEKSSALKVSSKLALLKKRDESSCQERESAETGKKENGVVIKVEKKSPKKNKIS
PSKTEVIPKSVSPEDTEKKRTNYQAYRSYLNREGPKALGSKEIPKGGENCLEGLTFVITG
VLESIERDEAKSLIERYGGKVTGNVSKKTSYLVMGRDSGQSKSDKALALGTKIIDEDGLL
DLIRTLPGKKSKYEIAFEAEVKKEKSKLEKTPQKADQRKRKTSPNKKDSESKKKKLSPQK
DSSVESVTTQTNGFQKVLDFQKQMAGEKKNLLKPEKYVTDQSKDKAESLLWVDKYKPTSL
KTIIGQQGDQSCANKLLRWLRNWPKNMSEDKKHVKAGKFGGKDDGSSFKAALLSGPPGIG
KTTTASLVCEELGYSYVELNASDTRNKNSLKEIVAESLNNTSIKDFYLNTGLDSGGRKHA
LIMDEVDGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
IEQIKGAMMSVAFKEGLKIPPSAMNEIILGANHDIRQVLHNLSMWCAESKALTYDQAKAD
SSRAKKDIKMGPFDVARKVFAAGEETAHMSLVDKCDLFFHDYSIAPLFVQENYLHVKPAA
AGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYSSVLPGELMRGFMTQF
PSFPSWLGKFSSTGKHDRIVQELALHMSLETYSSKRIVNLDYLSHMRDALVLPLTLHGTE
GVQNVVELMDTYHLMREDFENIMEISSWGGKPSSFSKLDPKVKAAFTRGYNKEVHLTPYS
LQVTKTSARQSGGPLLNSDYSEEFNEDESQAEEKDQDGIEMDAMIKQKRAKSSKSSKPEK
DTENKKAKGKNSKKT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttgttccaagtggaaagaaacttgtcaatgagata
gtaaaaaagaatgagaatacaaagactattgagggaacttcaaaggcaaagaaaggaaca
aaagaaattaaggtgaaaaattctcccaaagaagatgatgtaaaacgaaagcatggaaac
aagaaaaagagaattatctatgattcagactcagaacctgaagagacagtacaggtaaaa
aatactcagaaccaatcagagaaattgctgacgtctattaagcctcagaaaattccaagg
caggatcctgttgtatatgtttctgaaacagatgaagaagatgaagttatttataagaag
aaatctcttaaaccaaaagaaaatggaatatcttcaagtagtcatattggagcaccagat
gggaagaaagatattgggaaaaaaactcagattaagaataagcctttgtcaccaataaaa
cttacacctacatccgtgcttgattactttggaactggaagtgttcaaagatctgtaaag
aagttagttgcaagcaaaagaagagagccttcacaaaatactaatgattccacgttaact
gatgaagccgtggctgagcaactacaaattgaagagaattcagagattgagaggcagctg
catgaggatgaagaatttgccagaacactggcaatgttggatgatgaacccaagaacaaa
aaggcacgaaggaattcagaagagagagagatatcttcatctgaccaaattaattcaagc
aaatcagaaaagcataaagtaaaaacatcaaatttttcgcaagagagcaagaactacaat
tggaacaaacaaactaaaagtgaagattcaaaaggttctccactacattcatcaccttct
aaagtacctgacaaaatagaggaaaaatcctctgctttgaaagtcagctcaaagctggca
ctcctgaaaaaaagagatgagagtagttgccaagaaagggaatctgcagagactggaaaa
aaagaaaatggagttgtgataaaagtagagaaaaaatctcctaagaaaaataaaatctct
ccatccaaaacagaggtaatcccaaagtctgtgagtcctgaagatactgaaaagaaacgt
acaaattaccaggcttatcgaagctacctgaatcgagaaggtcccaaagctctagggtct
aaggagattccaaaaggaggtgaaaattgtctggaaggcctaacgtttgtaatcacagga
gtcctagaatctattgaacgagatgaagccaagtctctaattgagcggtatgggggaaaa
gtaactggaaatgtcagcaaaaaaacaagttacctagttatgggacgtgatagtggacag
tccaaaagtgataaggctttggctttgggaacaaaaattattgatgaagatggcttattg
gatctcattcgaactctgcctggcaagaagtccaaatatgaaatagcatttgaagctgag
gtaaagaaggaaaaatcaaaattggagaaaacaccacaaaaagctgatcaaagaaaaaga
aaaactagcccaaataagaaggactctgaatctaaaaagaaaaaattaagtccccaaaaa
gacagttccgtggaatcagttacaacacaaaccaatggttttcaaaaagtcctggacttc
cagaagcagatggctggggagaagaaaaatcttttaaaaccagagaaatatgtcactgac
caaagcaaagacaaggctgagagtttgctttgggtggataaatataagcccacctctctt
aagaccataattggacagcaaggtgaccagagttgtgctaacaagctcttacgatggctc
cgcaactggcccaagaacatgtctgaagataagaaacatgttaaagctggtaaatttggt
ggaaaagatgatggttccagttttaaagcagctctgctctcaggtcccccagggattggt
aaaacaactacagcttccctggtgtgtgaggaattgggatatagttatgtggaattgaat
gcgagtgacacccggaataaaaacagtttgaaagaaattgttgctgaatcactgaataac
accagcatcaaagacttctatttaaatacaggtttggattcaggaggcagaaaacatgct
ctgatcatggatgaagtagatggaatggcaggcactgaagatcggggaggaattcaggaa
ctaattggcttgatcaaacacacaaagatacctattatttgtatgtgtaatgatagaaat
catccaaaaatccgttccttggtacattattgctttgatcttcgctttcaaagacctcgg
attgaacagattaagggtgctatgatgtctgttgcttttaaagagggtttaaagattcct
ccttcagcgatgaatgaaattattctgggagcaaatcatgatattcgacaggttttgcac
aatcttagcatgtggtgtgcagaaagtaaagccctaacctatgaccaagctaaagcagat
tccagcagagccaaaaaagacatcaaaatgggtccatttgatgttgcccggaaagtgttt
gctgcaggagaagagactgctcatatgtcgcttgtggacaagtgtgatctcttcttccac
gattactccatagcacctctttttgtccaggaaaactatttacatgtaaaacctgccgct
gctggaggggatatgaaaaaacacttgatgcttttaagcagagcagcagatagtatatgt
gatggtgacttagttgatagacaaattcggagtaagcaaaactggagccttctacccaca
caggccatttactctagtgttcttcctggagagttgatgagaggcttcatgactcagttt
ccttcttttccaagttggttgggtaaattctcctccacaggcaaacatgatcgcattgtt
caagaattagcattgcatatgagtcttgaaacttactccagcaaaaggatcgtcaatctg
gattacctttcacatatgcgggatgctcttgttcttcctttgacattacatggcacagaa
ggggtacagaatgttgttgagcttatggatacatatcatctcatgagagaagactttgaa
aatatcatggaaataagcagttggggaggcaaaccgagttccttttccaaattggatcct
aaggttaaggcagcctttacccgaggctacaataaagaggtgcatctcactccatattca
cttcaagtaacaaagacatctgctagacagagtggggggccattgctgaattccgactac
agtgaagagttcaatgaggacgagtcccaggctgaggagaaagaccaagatgggatcgag
atggatgccatgatcaagcagaaaagggcaaaatcttcaaagtcttcgaaaccagaaaaa
gatacagagaacaaaaaagcaaaggggaaaaattcaaaaaaaacctaa
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integrated database retrieval system
