Macrotis lagotis (bilby): 141518437
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Entry
141518437 CDS
T11097
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141518437 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141518437 (CSTF3)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
141518437 (CSTF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
141518437
NCBI-ProteinID:
XP_074086538
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All DBs
Position
3:complement(257479996..257555219)
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AA seq
717 aa
AA seq
DB search
MSGDGAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLATIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKIPSSVDEAVRIIT
GGVPDMAVEGNGPMESNNMLAKAVKRPNEDSDEDEEKGAVVPPIHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgatggcgccgccgaacaggctgctgaatatgtcccagaaaaagtgaagaaa
gcagaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacatatgaacgtcttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagttatttcagagatgccttatgaaagttttacatattgattta
tggaagtgttatctttcctatgtcagagaaaccaagggaaaactacccagctacaaagaa
aaaatggcgcaagcatatgactttgctttggataaaattggaatggaaattatgtcttat
cagatttgggtggattacattaattttttgaaaggcgtggaagctgttggatcctatgca
gaaaatcagagaataacagctgtccggagagtttatcagcgaggttgtgttaatccaatg
atcaatattgagcaactttggagggactataataaatatgaagagggcatcaacatacat
ctagctaaaaaaatgattgaagataggagtagagattacatgaatgcccggcgcgtggca
aaggagtatgagacagtaatgaaaggtttagaccgcaatgccccttcagtccctccacag
aatactccccaagaggctcagcaagtagacatgtggaagaaatacatacagtgggaaaag
agcaaccctctccgaacagaagatcagacgctcatcacaaaaagagtgatgtttgcatac
gagcagtgcctgctggtgctgggccatcaccccgatatttggtatgaagctgcccagtac
ctggagcagtccagcaagttgctggctgagaagggggacatgaataatgctaagttattt
agcgatgaagctgccaacatctatgagagagcaattagcactttgttgaagaaaaatatg
cttctttactttgcatatgcagattacgaagagagtcgaatgaaatatgagaaggtgcat
agtatatacaatcgtcttctggccatcgaggacatcgacccgactttggtatatatccaa
tatatgaagtttgcaagacgagcagaaggcatcaaatctggaaggatgatatttaaaaaa
gcaagagaggatactagaacccgccatcatgtctatgttactgcagcattaatggagtac
tattgtagtaaggataaatcagtggcctttaagatttttgagctggggttaaaaaaatat
ggagacattccagaatatgtattagcttatattgactacttgtctcacctcaatgaggac
aataatacccgagttttgtttgaaagagtattaacttctggaagccttccacctgagaaa
tctggagaaatatgggccagattccttgcttttgaaagtaacattggtgatctagccagt
atcctgaaagtggagaaaagacgattcacagcattcaaggaagaatatgaaggcaaagaa
acagccttactggttgatagatacaagttcatggatttgtatccctgctctgcgagtgaa
ctgaaggctcttggctataaggatgtctctcgagccaagttagcgacgatcattccagac
cccgtggtagcgccttccatagtacctgtcctaaaagacgaagtggatagaaagcctgaa
tatcccaagccagacacccagcagatgatcccctttcagccaaggcacttagcaccccca
ggcctacacccagtgccaggcggagtgtttccagtaccacctgctgctgttgttttaatg
aagctcctccctcctcctgtctgtttccagggtccttttgtgcaagtagatgaattgatg
gaaattttccggagatgcaagattccaagctctgtagatgaagcggtgaggatcattacg
ggaggagtgccagacatggccgtagaaggtaacggccccatggaaagcaacaacatgctc
gccaaagccgttaaacgacccaacgaggattcagatgaagatgaagagaaaggtgctgtg
gtgccgcccatccacgacatctacagagcacgacagcagaagagaatccggtga
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