Macrotis lagotis (bilby): 141518880
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Entry
141518880 CDS
T11097
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03008
Ribosome biogenesis in eukaryotes
mlao03013
Nucleocytoplasmic transport
mlao03015
mRNA surveillance pathway
mlao05014
Amyotrophic lateral sclerosis
mlao05164
Influenza A
mlao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141518880 (NXF1)
03015 mRNA surveillance pathway
141518880 (NXF1)
03008 Ribosome biogenesis in eukaryotes
141518880 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
141518880 (NXF1)
05168 Herpes simplex virus 1 infection
141518880 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
141518880 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141518880 (NXF1)
03009 Ribosome biogenesis [BR:
mlao03009
]
141518880 (NXF1)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141518880 (NXF1)
mRNA cycle factors
Stress granule specific factors
141518880 (NXF1)
Ribosome biogenesis [BR:
mlao03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141518880 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
141518880
NCBI-ProteinID:
XP_074087367
LinkDB
All DBs
Position
3:285913528..285926415
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AA seq
628 aa
AA seq
DB search
MRQAAPELSLRGKDHDDRVGGNFPQRRKKGRGPFRWKYGETNSRSRNRGGSGPRAPRLDE
EDGDVAMSDAQDGPRVRYTPYNSRPNRRGGDNWHDRERIHVTVRRERSGQDRGAAAGSSL
DAVSKNWFRITIPYGRKYDKTWLLNSIQSKCSVPFNPVEFHYENTRAQFFVEDASTASAL
KAVNHKILDRDNRRISVIINPSAPPLSVQNELKPEQVEQLKFVMSKRYDGSQQALDLKGL
RTDPDLVAQNIDVVLNRKSCMSASLRIIEENIPELLSLNLSNNRLYRLDDLSEIIQKAPN
LKILNLSGNELKSERELDKVKGLKLDELWLIGNPLCDVFRDQSSYVSAIRECFPKLLRLD
GHELPPPIAFDVEAPTTLPPCKGSYFGSENLKAMVLYFLQQYYSVYDSGDRQGLLDAYHD
QACCSLSIPFTIQNPARGNMSEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKT
QHDINSFVVDICAQTETLLCFSVHGVFKEVDGKSRDAVRAFSRVFIAVPSNNAARLCIVN
DKLFIRNATTDEIRRAFAMPAPTPSSSPVPTLAPEQQEMLQTFSTQSGMNLEWSQKCLQD
NDWDFPRAAQVFTQLKAGGKIPEVAFLK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggcagcacctgagctgagcctcagaggaaaggaccatgatgaccgtgttgga
gggaacttcccccaaagacggaagaaaggccggggccccttccgttggaaatatggtgag
acaaattcacggtcccgaaaccgaggtggttccggccctcgagccccacgtctggatgag
gaagatggtgacgtggccatgagtgatgcccaggatggtccccgagtccggtacacaccg
tacaactcacgccctaaccggaggggaggagataattggcatgatcgagagagaatccat
gtcacggtgcgccgtgagagatctggccaagatagaggagccgccgctggttccagcctg
gatgcggtttccaaaaactggttcaggatcacaatcccttatggcaggaagtacgataag
acttggttgttgaactcgatccagagcaagtgcagcgtgcccttcaatcctgtggagttt
cattacgagaacacccgggcccaattcttcgtggaggatgccagtacggcgtctgccctc
aaggctgtgaatcacaagattttggaccgagataatcgaaggatttcggtcataatcaac
ccgtctgccccacccctgtcggtgcagaatgagctgaagcctgagcaggtggagcagctc
aagtttgtcatgagcaagcgctacgatggctcccagcaggccctggacctgaagggcctc
cgtacagacccagacttggtggcccagaacatcgatgttgtcctgaatcgcaaaagctgt
atgtcggcctctctccggatcatcgaagaaaacatccctgagttgctgtcattgaatctg
agcaacaaccgactctacaggctggacgatttgtctgaaatcatccagaaggcgccgaat
ctcaagatcttgaacctttctgggaatgaactgaagtcagagcgagagctggacaaggtg
aaggggctcaagctggacgagctgtggctcatcgggaaccctctgtgtgatgtgttccgg
gaccagtcctcctacgtaagcgccatccgggaatgcttccccaagttgcttcgcctggac
ggtcacgagttgccccctccgattgcctttgatgtggaagcccctaccacgctcccgccc
tgcaaggggagctactttggatcagaaaacctgaaggccatggtcctgtacttcctgcag
cagtattactccgtgtatgactccggggacaggcaggggctgctggacgcctaccacgac
caggcctgctgctccctcagcatccccttcaccatccagaacccggctcgtggcaacatg
agcgagtacttcaaagacagccggaacgtgaagaagctgaaggaccccaccctgcgcttc
cgcctgctgaagcacacccgcctcaacgtcgtggccttcctcaacgaactccccaagacc
cagcacgacatcaactccttcgtggtggacatctgcgcccagacggagacgctgctgtgc
ttttccgtgcacggggtcttcaaggaagtggacgggaagtcccgcgacgcggtccgcgcc
ttctcccgggtgttcatcgccgtcccttccaacaacgcggccaggctctgcatcgtcaac
gacaagctgttcatccgcaacgccaccacggacgagatccgccgcgccttcgccatgccc
gcgcccacgccctcgtccagccccgtgcccacgctggcccccgagcagcaggagatgctg
cagaccttctccacgcagtccggcatgaatctcgagtggtcgcaaaagtgccttcaggac
aacgactgggacttcccccgcgcggcgcaggtcttcacgcagctcaaggccggcggcaag
atccccgaggtggccttcctcaagtga
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