Macrotis lagotis (bilby): 141518987
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Entry
141518987 CDS
T11097
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141518987 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141518987 (PATL1)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141518987 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
141518987 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
141518987
NCBI-ProteinID:
XP_074087513
LinkDB
All DBs
Position
3:290670592..290714887
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AA seq
767 aa
AA seq
DB search
MFRYESLEDCPLDEDDDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEEKP
VATVQQTGNGSTDEMDLLGDHEENLAERLSKMVIDNELEDPAIMRALQTRPVVQPGGLNS
SIWDGSAVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGAEEERDLSERALPRRSTSPVIG
SPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRAPMQQRYPAPYGERMSPNQLCGVANS
SLLGHPFPPSVTPVLSPIQRAQLLGGAQPGRMSPSQFARLSGFVSSPLASMNPKLLQGRV
GQMIPPAPGFRAFFGAPPPATPPPAQQHPSCPGPHLQNLRPQAQLFRPDTTHLHPQHRRL
LHQRQQQNRNQHRSINGATGDRGSHRSNHQEQLRKDPYANLMLQREKDWVSKIQMMQLQS
TDPYLDDFYYQNYFEKLEKLSAAEEVHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLG
KLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVTIEKTYSLLLDVEDYERRY
LLSLEEERQALMEERKQKICDMYDNLRGKLPGQERPSDDHFMQIMCIRKGKRMVARILPF
LSKEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSMTVTSLLQQLMNLP
QSAAAPAPANPHLTAVLQNKFGLSLLYLVLSRGEELQSSDAATELMQDNQWTELMFMATR
ELLRMPQMTLAKPVSTPANLTSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgctacgagtccctggaagattgtcctctggatgaagacgatgatgcttttcag
gctctgggggaggaagatgaggatattgatcaattcaatgacgacacatttggagcagga
gccgttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagagaagcca
gtggcgactgttcaacagacaggcaatggaagcactgacgagatggacttgctgggagac
catgaagagaacctggcagaaagactcagcaaaatggtgattgacaatgaactagaagac
cccgccattatgagggccctgcagacccggcccgttgtacagcctggaggtctcaattct
agcatttgggatggctctgcagttctgagacgaatacgaggaccactgcttgctcaggaa
atgcctacggtgtctgtgttagaatatgccttgcctcagagaccccctcagggtgcagaa
gaggagcgggatctttctgagcgggcattaccaaggcgttcaacttctccggtcattggg
agcccccctgtcagagcagtcccaataggcaccccacctaagcagatggctgtacccagt
tttaaccagcagattctttgtccgaagcctgttcatgttcgtgctccgatgcaacagcga
tatcctgctccctatggcgagaggatgtctccaaaccagctctgtggagttgcgaactct
tcccttctgggccacccgttccctcccagtgtcacacctgttctcagccccattcagaga
gcacagcttcttggaggagctcagcctggacggatgtctcccagccagtttgctcgtctc
tctggatttgtaagcagtcccctcgcttcaatgaatcccaagttgcttcaaggacgggtt
ggccaaatgattcccccagctcctggcttccgtgccttctttggagcacctccaccagct
acaccacccccagcacagcagcatccctcctgcccaggacctcacttgcaaaacctaaga
cctcaggcccagttgttcagaccggacacaacccaccttcatccccagcaccgtcgcctc
ttacatcagagacagcagcagaatagaaatcaacatcgaagtataaatggtgcaacaggg
gatcgaggaagtcaccggagtaaccatcaggaacaactacgaaaggatccatatgccaac
cttatgttacagcgggaaaaagattgggtttcgaagatccagatgatgcagttacaaagc
actgatccctacctggatgacttttattaccagaactactttgagaaactggagaaactc
tcagctgctgaggaagtacatggagatggccccaagaaagaacgtaccaagctgatcacc
ccacaagtggcaaagctggagcatgcctataagccagttcaatttgagggctctttggga
aagcttactgtctctagtgtgaataatccccggaaaatgattgatgctgtggtaacatcc
cggagcgaagatgatgagaccaaagagaaacaagttcgggacaagagacgaaaaactctc
gttacaattgagaaaacatacagtctgctcctggatgtggaggattatgaaaggcgctat
cttctaagcctggaagaggagcgacaggcactgatggaggagagaaaacagaagatatgc
gatatgtatgacaacctgagggggaaattgcctgggcaagagaggccaagtgatgaccac
tttatgcaaatcatgtgtattcgtaaagggaagagaatggttgcccgtatcctccctttc
ttgtccaaagagcaagcggctgatatccttatggcaacagccaggaacctgccctttctg
atcaaaaaggatgcccaagatgaggtattaccttgcttattgagtcccttctcccttctc
ctttatcatcttccatcaatgactgtcaccagccttctgcaacagctaatgaacctacct
caaagtgcagctgcaccagcacccgccaacccacacctcactgctgtgctccagaacaag
tttggcctatcattgctctatctggtcctgagccgaggagaagaactacagagttcagac
gcggctaccgagttgatgcaggacaaccagtggacagagctgatgttcatggccacaaga
gaactcctgcggatgccccagatgaccttggctaagcccgtctccacacctgcaaacctc
acatcccttttttctcgatatgttgaccgacagaaactgaacctgcttgagacaaaattg
cagttggttcaggggatacggtaa
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