Macrotis lagotis (bilby): 141519024
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Entry
141519024 CDS
T11097
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141519024 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141519024 (CLP1)
Enzymes [BR:
mlao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
141519024 (CLP1)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
141519024 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
141519024
NCBI-ProteinID:
XP_074087575
LinkDB
All DBs
Position
3:complement(294325547..294331406)
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AA seq
426 aa
AA seq
DB search
MTEESNDEKKPLAKFELERETELRFEVEASQSAQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREYRDER
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENISETSVAGFIVVTSVNLEHHFFTVLSPAPRPLPKNILLIMDIR
FMDLKR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaatccaatgatgagaagaagccactggctaagttcgagttagaaagggag
acggaactacgttttgaggtagaggcttcccagtcagcccagttggaactactggctgga
atggcagagatctttggcacagaactgactcgaaacaaaaaattcacttttgatgcaggt
gccaaagttgctgtcttcacttggcatggctgttcactccagctgagtggtcgaactgag
gtagcttatgtctccaaggacactcccatgctcctttatcttaacactcacacagccctg
gaacaaatgagacggcaagcagagcgagaggaagagcgaggtcctcgagtgatggtagtt
ggccctacagatgtgggcaaatccacagtatgccgccttttactcaactatgctgtacga
ctaggccggagacccacctatgtggagctggatgtcggccaaggctctgtgtccattcct
ggaactatgggagccctttatattgagcgaccggctgacgtagaagagggtttctctatc
caggccccacttgtctatcattttggctccactacacctggtaccaacatcaagctatac
aataagattacgtcacgcctagccgacgtcttcaatcaacgttgtgaggtgaaccgccgt
gcctctgtcagcggctgtgtcattaacacctgtgggtgggtcaagggctcgggttaccag
gccttggtgcatgccgcttctgcctttgaggtggacgtggtggtggtgctggaccaggag
cgcctctacaatgagttgaagcgggacctgccccactttgtgcgtacagtgctcctcccc
aagtcgggaggagtggtggagcggtccaaggacttccgccgggaatatagggacgagcgc
atccgggagtatttctatggtttccggggttgtttctatcctcatgccttcgatgtcaag
ttctccgatgtcaaaatctacaaggtgggggctcccaccatcccagactcctgtctccct
ttgggcatgtcgcaggaggacaatcagctgaagctggtgcctgtcacccctgggcgagac
atggttcaccacctccttagtgtcagcacggcggagggcacagaggagaacatctctgag
accagtgtggctggcttcattgtggtgactagtgtgaacctggagcaccatttttttact
gtgctctctccagcccctcgcccactgcctaagaacatcctcctcatcatggacatccgc
ttcatggatctcaagcgctga
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