KEGG   Macrotis lagotis (bilby): 141520729
Entry
141520729         CDS       T11097                                 
Symbol
SKIC8
Name
(RefSeq) superkiller complex protein 8 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
mlao  Macrotis lagotis (bilby)
Pathway
mlao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mlao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141520729 (SKIC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlao03019]
    141520729 (SKIC8)
Messenger RNA biogenesis [BR:mlao03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     141520729 (SKIC8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_HPS5 WD40_RFWD3 PROPPIN Tricorn_2nd NBCH_WD40 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 WD40_like WDR54 VPS8_N WD_LRWD1 Beta-prop_RIG_1st Beta-prop_IFT122_2nd DUF2415 Beta-prop_pof12 Nucleoporin_N Chorion_S16 Vgb_lyase Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 141520729
NCBI-ProteinID: XP_074088610
LinkDB
Position
4:35284436..35302549
AA seq 305 aa
MSVQYSILFKQEQAHDDAIWSVAWGLNQKDNSEMIVSGSLDDLVKVWQWKNEKLELQWSL
EGHQLGVVSVDISHTGTIAASSSLDAHIRLWDLENGKQMKAIDAGPVDAWSLAFSPDSQF
LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF
CPDDIHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNSHGSKIVSVGDDQEIHI
YDCPT
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtgtccagtatagcattctcttcaaacaagaacaagctcatgatgatgccatctgg
tcagttgcctgggggttgaatcaaaaagataactctgaaatgattgtgtcaggatccttg
gatgatctagtcaaagtatggcaatggaaaaatgagaaactggagttacagtggagtttg
gagggccatcagttgggtgtggtttctgtggacatcagtcacactggaaccatcgctgcc
tccagttcacttgatgctcacattcgtctgtgggatttagaaaatggcaaacagatgaag
gctattgatgctggtcctgtggatgcctggtccttggctttttcacccgattcccagttt
ttggctacaggaagccatgtggggaaagtaaacatttttggtgtcgagactggaaaaaag
gaatactctttggatacaagagggaaattcatcctcagcattgcctatagtccagatggg
aagtatctggccagtggagccatagatggaatcattaatatttttgatatcgcaactgga
aagcttctccatacgctcgaaggccatgcaatgcccatccgctctctgaccttctcccct
gattctcagctccttgtcacggcttcagatgatggctacattaagatttatgatgtacag
catgcaaatttggctggtacactgagtggccacgcatcctgggtgttaaatgtagcattt
tgtccggatgatattcactttgtttccagttcatcagacaaaagtgtcaaagtttgggat
gccggaaccagaacttgtgtccacacattttttgaccaccaggatcaggtctggggagta
aaatacaattcacatggctccaaaattgtgtccgttggagatgaccaagaaattcatatc
tatgactgtccaacttaa

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