Macrotis lagotis (bilby): 141521089
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Entry
141521089 CDS
T11097
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141521089 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141521089 (EXOSC1)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
141521089 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
141521089 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
141521089
NCBI-ProteinID:
XP_074089317
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Position
4:77718356..77723985
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AA seq
212 aa
AA seq
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MDLQPASCDGCWEVMAMAPPLRYCIPGERLCNLEEASPGSGTYTRHGYIFSSLSGCLVKT
SDNGELPVVSVTRETESQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIR
KEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESAGVQ
MVPISWCEMQCPRTHTKEFRKVARVQPEFLQT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggatttacagccggcctcctgcgatggctgttgggaggtcatggctatggcgccgccg
ctgcggtactgcatcccaggagaacggctgtgcaacctggaggaggccagcccgggcagc
ggcacctacacccggcacggctacatcttctcctcgctctccggctgcctggtgaagacg
agcgacaacggcgagcttccggtggtgtcggtgacgagggagaccgagtcccagctgctg
ccggacgtggggaccatcgtgacctgcaaggtctccagcattaattctcgatttgccaaa
gtgcatattttatatgtgggatccacaccactcaagaattcctttagaggaacaatcagg
aaggaggatgttcgagctactgaaaaagacaaggttgaaatatataagagtttccgccca
ggtgacatcgtgctggccaaagtgatctccctaggtgatgctcagtccaactacctgcta
acaacggcagaaaatgagctgggagtggtggtggcccacagtgaatcagcaggtgtccag
atggtccccatcagctggtgtgagatgcagtgccccaggacacacaccaaagaattccgc
aaagtagcaagagtccagcctgagttcctgcagacatag
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