Macrotis lagotis (bilby): 141522050
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Entry
141522050 CDS
T11097
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao04140
Autophagy - animal
mlao04148
Efferocytosis
mlao05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141522050 (VPS18)
04148 Efferocytosis
141522050 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141522050 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlao04131
]
141522050 (VPS18)
Membrane trafficking [BR:
mlao04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141522050 (VPS18)
Hops complex
141522050 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-RING_16
zf-C3HC4_2
zf-ANAPC11
KNOX2
zf-C3H2C3
zf-RING_2
zf-rbx1
KIF21A_2nd
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
141522050
NCBI-ProteinID:
XP_074091223
LinkDB
All DBs
Position
4:201183426..201192761
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AA seq
972 aa
AA seq
DB search
MASILDQYEDSLSRSAVLQPGCPSVGIPHSGFVNVPLEKEAPIFTKQRIDFTPADRITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDEAKVHKMFLDHTGSHLLIALSSTE
VLYINRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLMEEGGPAPVCSIEAERVTDGRCFVIATTRQRLFQFTGRVTEGTE
VQGFSGLFATYTDHPPPFREFPSSLGYSELAFYTPKLRSAPCAFAWMMGDGVLYGALDCG
RPDSLLSEERVWDYPPGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAHTERAVFRYHVQRESRDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYVESARCYALTQSYFEEIALKFLEVRQEEALAEFLQRKLAGL
KPTERTQATLLTAWLTELYLSRLGALQGDPDSLPLYRETRERFRDFLSSPRNKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLSRHHDPQLFYKFSP
ILIRHIPQQLVDAWIELGNRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNELGETE
QAIHNYLLSLYARGQAASLLAYLEQAGTSPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
EFYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVKTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLQAYNRHIDELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSACDFPLLNRPFYVFLCSHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPSKGPPRTKEGEGGTPAAPSREQLKVDLDELVAAECVYCGELMIRSIDRPFID
PQRYEEEHQSWL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggaccagtacgaagactcgctgtcgcgctcggccgtcctgcagccg
ggctgccccagcgtgggcatcccccactcggggtttgtaaatgtcccacttgagaaggag
gcacccatatttaccaagcagagaatcgactttactcctgctgaccgtatcactagcctc
gtagtctcctgcaatcaactctgcatgagcctgggcaaggacacccttctccgcattgat
ctgggaaaggcaaacgaacctaatcacgtggagttgggacgcaaagatgaagccaaagtt
cataagatgtttctggatcacactgggtcacacctcttgattgctcttagcagtactgag
gtcctctacataaaccgcaatggacagaaggttcgaccactggcacggtggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggtacagagagcagcactggacccatc
ctggtgggtacagcccagggccagatctttgaagcagaattgtcagccagtgaaggtggc
ctttttggtcctgcacctgacctctatttccgcccactttatgtactgatggaggaagga
ggcccagcacctgtgtgctccatagaggcagaacgtgtcactgatgggcgttgttttgtc
attgccactactcgccagcgcctcttccaattcacaggccgtgtaacagaggggactgaa
gtccagggcttttcagggctctttgccacatatactgaccacccaccaccttttcgagaa
ttcccaagcagtctgggttatagtgagttggctttctatactcccaagctgcgttctgca
ccctgtgcttttgcctggatgatgggggatggtgtactgtatggagcactggactgtggg
cgtcctgattctttgctgagtgaagaacgagtgtgggattatccaccaggtgtaggccct
ggagccagcccacctctagctatcgtcttgacccagttccacttcttgttgctcctagca
gaccgagtagaagcagtgtgtacattaacagggcaggtggttttacgagatcactttcta
gaaaagtttggaccactgcgacatatggtcaaagactcctctacaggccacctgtgggct
cacactgagcgggctgtgttccgttatcatgttcagcgtgagtcccgggatgtttggcgc
acctatctggatatgaaccgttttgacctggccaaggaatattgccgtgagcgacctgac
tgcttagacacagttctggcccgcgaggctgatttctgcttccgccaacgccgctacgta
gagagcgcccgatgctatgccctgacccaaagctactttgaagagattgccctcaagttc
ctggaagttcgacaggaggaggctttggcagaattcttgcagcggaaattggcggggctc
aagccaactgagcgcacccaggccacactactcacagcctggctgacggaactttacctg
agccgccttggagcattacaaggtgatccagattctttgcctctttatcgggaaacacga
gagcgattccgagattttctcagtagcccacgcaacaaagaatggctctttgccagccga
gcctcaatccatgagttactggctagtcatggggacacagaacacatggtgtattttgct
gtgatcatgcaggactatgagcgggtagtagcatatcactgccagcatgaagcctatgag
gaggctttggctgtgctctcccggcaccacgatccccagctcttttacaaattttccccc
attctcattcgtcatattcctcaacagctagtggatgcttggattgagctgggcaaccgg
ctggatgctaggcagcttatcccagccctggtgaactacagccaaggtggggaagcccag
caagtgagccaggccatccgctacatggaattctgtgtgaatgagctaggggagactgag
caagccattcataactacctgctctcattgtatgcaagaggtcaggctgcctcattgctg
gcctacctggagcaggcagggaccagtccccaccgagtacattatgatctcaaatatgcc
ctgcgactctgtgcagaacatggccatcaccgagcctgtgttcatgtctacaaggtgttg
gaattttatgaagaggctgtcgacttggctctccaggtggatgtggatctggctaaacaa
tgtgcagatctgccagaagaagatgaggagctacgtaagaaactgtggctgaagattgcc
cggcacgtggtgcaggaggaagaagatgtgaagactgccatggcctgtctggctagttgt
cctctcctcaaaatagaggatgtgctgcctttctttcctgactttgtcactattgaccac
ttcaaagaggccatctgcagctccctgcaggcctacaaccggcacattgatgagctgcag
cgggagatggaagaggctacagctagtgcccagagaattcggcgagatctacaagagctt
cgtggacgctatggcaccgtggagcctcaagacaagtgctcagcctgcgactttcccctg
ctcaatcgtcctttctatgtctttctttgtagtcacatgttccatgctgactgtctcctg
caggctgttaggcctggcctccctgcctataagcaagcccgcctggaggagctgcagcga
aagctaggggctgctccccctcccagcaaaggcccacctcgcacaaaagagggagaagga
gggactccagcggcacccagccgagagcagctgaaagttgacctggatgagctggtggca
gctgaatgtgtctactgcggggagctgatgatccgttccattgatcggcctttcatcgac
ccccaacggtatgaagaagagcaccaaagctggctttag
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