Macrotis lagotis (bilby): 141523467
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Entry
141523467 CDS
T11097
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141523467 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlao03019
]
141523467 (SKIC2)
Enzymes [BR:
mlao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141523467 (SKIC2)
Messenger RNA biogenesis [BR:
mlao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141523467 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
141523467 (SKIC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
RE_AccI
DUF3516
Motif
Other DBs
NCBI-GeneID:
141523467
NCBI-ProteinID:
XP_074092764
LinkDB
All DBs
Position
5:complement(8332428..8344228)
Genome browser
AA seq
1249 aa
AA seq
DB search
MLETERLVLPPRGPLDLPLCALELGCTGRWELVSPPLASDLPAGTLSHGLPPCAPELQGE
TEQLFLSSPEWLPLHSVDRVAWKWQRKTDPWSLLGLPGAPVPSDLQAQRHPTTGRVLGYR
EVLLEDTNLSATTSLSLRRPPGPPSQALWGNPTHYPFWPGGMDEPTIADLSTRGDCEEEI
DFEKDLLTIPPGFKKGIDFTPKNHSTSASGLLSLSHLLEPLELGGGEEEEEETSGRLGGL
GRDSVTTSTSQPPLVRASSLEDLVLKEASAPMSPAEPPKPPVLEQWAIPVDITSPVGDFY
RLIPQPAFQWPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI
YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL
EWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRHLYV
ISTAARPVPLEHFLFTGNSPKTQGELFLLLDSRGVFHTKGYYAAVEAKKERTSKHAQTFG
AKQPMHQGGPGQDRGIYLSLLASLRSRSQLPVVVFTFSRGRCDEQASGLSSLDLTTGSEK
SEIHLFLQRCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVK
VLFATETFAMGVNMPARTVVFDSMRKHDGATFRDLLPGEYVQMAGRAGRRGLDPTGTVIL
LCKGRVPEMADLHRMMLGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRK
DSKAHEQTLAELTKRLGDLEEPDTSGQLVDLPEYYSWGEELTEIRGLIQQRIMESVNGLK
SLSVGRVVVVKNQEHCNALGVILQVSSDTTNRVFTTLILCEKQPLEGPLPGSSSSLDVPY
PDDLVGHKLFLPEGPCDHTVAKLQPGDITAITTKMLRVNGERILEDFSKRQQPRFKKDSP
SPAVTSAVQEMLRLAQAHPAGPPALDPVNDLQLKEVSVVEGGLRARKLEELIRGAQCVHS
PRFSAQYLRLRERAQIQKEMERLRFLLSDQSLLLLPEYHQRVEILRTLGYVDGAGTVKLA
GRVACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPADQLPGTLKQGIER
VKDVARRIGEVQVSCGLNQTVEEFVGELHFGLVEVVYEWARGMPFSELAGLSGTPEGLIV
RCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATMLRRDIVFAASLYTQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaccgagaggctggtgctgccccctcgggggcccctggacttgcccctctgt
gccctggagctcgggtgcaccgggcgttgggaacttgtgagcccgcccctggcctcggac
ctgccggccggcaccctctcccatgggctaccaccttgtgctccagaattgcagggagag
actgagcaactgtttctgtcatcccctgaatggctgcctctgcacagtgtggatcgtgtg
gcctggaaatggcagaggaagacagacccctggtctctcctgggacttccgggagctcca
gttccatcagatcttcaggctcagagacacccaaccactggcagagtcctgggctataga
gaggtcttgttggaggacacaaacctctcagccacaacttctctgtcactacgccggccc
ccaggacccccatcccaggccttatggggcaacccaacacactacccattctggccaggt
gggatggatgaacccaccatagcagatctgagcactcgtggggactgtgaggaagagatt
gactttgagaaagatctccttaccattcctccaggcttcaaaaaaggcatagactttacc
ccaaagaatcattcaacctctgcttctggcctcctcagtctcagccatctcctggagccc
ctagaattgggtggaggggaggaggaggaagaagagacttcaggaagattgggggggctt
ggacgggacagtgttacaacctctacctctcaaccaccattggtccgtgctagtagcctg
gaggatttagtcctaaaggaagcatcggcccccatgtctcctgcagaacctccaaagccc
ccagtcttggaacagtgggccattcctgtagatattacttcacctgtgggagatttctac
aggctcatcccccaacctgcttttcagtggccatttgaaccagatgtatttcagaaacag
gctattctgcacctggagagacatgattctgtttttgttgccgctcacacatctgcagga
aagacagttgtggctgaatatgccattgcccttgcccagaaacatatgacccgtaccatc
tatacatcacccatcaaagccctgagtaatcagaagttcagagatttccgaaacacattt
ggggatgtcggactcctcacaggggatgtccagctacatcctgaagcttcctgcctcatt
atgaccacagagatacttcgctccatgctatatagtggctcagatgtgattcgagacctt
gagtgggtgatatttgatgaggttcattacatcaatgatgctgagcgaggagtagtatgg
gaagaagtactcatcatgctccctgatcatgtttccatcattctcctcagtgctactgtt
cccaatgctttagaatttgcagactggattgggaggctaaagcgtcgtcatctttatgtg
atcagcacagctgcccgaccagttcccttggagcattttctgttcactgggaatagtcca
aaaacccaaggagagctatttctgcttctggattcacgaggagtcttccacactaaggga
tactatgcagctgtggaggccaagaaagagagaactagcaaacatgcccagacctttggg
gcaaagcagccgatgcaccaaggagggcctggacaggaccgaggaatatacctgtccctc
ctggcctccctacggagccgttcccagcttcctgtggttgtgttcaccttctcccggggc
cgctgtgatgagcaggcatcgggtctcagctcccttgaccttaccactggctctgagaag
agtgagatccaccttttccttcaacgatgccttgccagacttcgtggttcagatcgccag
ctacctcaggtattgcacatgtcagagctccttcgccggggtctaggtgtccaccacagc
ggtattttgcccattctcaaggaaattgtggaaatgctcttcagtcgtggtttggtcaag
gtcctctttgctacagaaacctttgctatgggtgtgaacatgccagcacggactgtggtg
tttgattctatgcgcaagcatgatggtgcaactttccgtgatttactccctggagaatat
gtacagatggcaggacgggcagggcgtcgtggcctggatcctacaggcacggtcatcttg
ctttgtaagggacgtgtgcctgaaatggctgatctgcaccgaatgatgctggggaagcct
tcccagctacagtcccaattccgtctcacttatacaatgatccttaaccttcttcgggtt
gatgcactcagagtggaagatatgatgaagagaagtttttctgaatttccttcaagaaag
gacagcaaggctcacgagcaaactttggcagaactgacaaaacgactaggggatttggag
gagccagacacgtcgggtcagctggttgatcttcctgagtattacagctggggggaggag
ctgacagaaattcggggtctgatccagcaacgaatcatggaatcagtgaatgggctgaaa
tctctgtcagtgggaagagtggtggttgttaagaatcaggagcattgtaatgcactagga
gtgatcttgcaggtctcctcagataccacaaaccgagtcttcactaccttgattctgtgt
gagaagcagccccttgaggggcccctgcctggcagttctagctctcttgatgtcccctat
cctgatgatctggtgggtcacaaactgttcctgcctgaagggccttgtgatcatactgtg
gccaaacttcagccaggtgatatcactgccatcacaacaaagatgctacgggtgaatggg
gagcgaatcttggaggattttagcaagaggcaacagccaagattcaagaaagattctccc
tctccagctgtgacttctgctgttcaggagatgctccgcttggctcaggctcacccagca
gggcccccagccctggatccagtaaatgatctgcagctgaaggaggtgtctgtggtagag
ggtgggcttcgtgcacggaaactagaggagttgatccgaggtgcccagtgtgtccacagt
cctaggttttcagctcagtacctgaggcttcgggaacgtgctcagatccagaaggagatg
gagagattacgatttctgctttcggaccaatcactcctcctgctgccagaatatcatcag
cgtgtggagattctgcggacattgggctacgtggatggtgctgggactgtaaagctggca
gggagggtggcctgtgccatgagtagccatgagctgctcctgacagagctcatgtttgac
aatgcactgagtactcttcggccagaggagatcgctgctttgctctctggcttggtctgt
caaagtcctggagatcctgcagaccagttgccgggcactcttaaacagggcatagagcgt
gtcaaggatgtggcccggcggattggtgaagttcaggtatcctgtggcctgaaccagact
gtggaagagtttgtgggagagctacactttgggctggtagaagttgtctacgagtgggca
cgaggcatgcctttctctgagctggcagggctatcagggaccccagagggcctgattgtc
agatgtatccagcgcttggcagagatgtgtcgttcattgagaggggctgctcggctggtg
ggagaacctgtcctgggtgctaagatggagacagctgccacaatgctccgtcgtgacata
gtttttgctgctagtctttatacccaatga
DBGET
integrated database retrieval system
