Macrotis lagotis (bilby): 141523520
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Entry
141523520 CDS
T11097
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141523520 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlao03041
]
141523520 (DHX16)
Enzymes [BR:
mlao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141523520 (DHX16)
Spliceosome [BR:
mlao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
141523520 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_22
AAA_30
AAA_19
nSTAND3
Flavi_DEAD
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
141523520
NCBI-ProteinID:
XP_074092867
LinkDB
All DBs
Position
5:9555376..9577383
Genome browser
AA seq
1042 aa
AA seq
DB search
MATPAALERWVQDELHTVLGLSERHVAQFLIGTAKRCGSAEEFVERLRDTGTLDLSGPAR
DFALRLWTKVPRKAVVERSAQIAEREALALLEKNRSYQLLEESEESDGEIQGLVRSGSQK
KKKKRKHLRKKTLEEEEEEQGLEGDKKKARLIKTEEQKSESEDEWERTERERLQDLEERD
AFAERVRKRDKERTRNILERSDKKAYEEAQKRLKMAEEDQKAMVPELRKKSRREYLAKRE
REKLEDLEAELADEEFLFGDVELSHTERQELKYKKRVRDLAREYRAAGEQEKLEATTRYH
MPEETRGQPTRGIELVEEESGAPGEEQRRWEEARLGAAFLRFGAKDAALSEPKYQLVLEE
EETIEFVRATRLQGDEEPSAPPPSSGDQQKESIRAVRHSLPVFPFRNDLLDAIANHQVLI
IEGETGSGKTTQIPQYLFEEGYTQRGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGY
SIRFEDCTSERTVLRYMTDGMLLREFLSEPDLGSYSVVMIDEAHERTLHTDILFGLIKDV
ARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSV
LQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARI
FQPTPLGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASA
NQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFD
FLDPPPYETLLLALEQLYALGALNHLGELTTPGRKMAELPVDPMLSKMILASEKYGCSEE
ILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWVESGYSSQWCY
ENFVQLRSLRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGY
RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESGWLLEVAPHYYKAR
ELEDPNAKKMPKKVGKTREELG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccggcggcattagagcgctgggtgcaggacgagctgcacacggtgctgggc
ctgagcgagcggcacgtcgcgcagtttctcatcggcaccgctaaacgctgcggatcggcg
gaagagttcgtggagcgactgcgggacaccggcaccttggacctcagcggaccggcccga
gactttgcgctgaggctctggaccaaggtcccacggaaggcagtagtagaaagatcagcc
caaatagcagagcgtgaagctttggctttgctagagaagaaccgttcataccagcttctg
gaggaaagtgaagagagtgatggggaaatccaaggcctagtgagaagtgggtctcaaaaa
aagaaaaagaaacggaaacatcttaggaagaagaccctggaagaagaggaagaagaacag
ggtttggagggggacaagaagaaggcaaggttaattaagactgaggagcagaagtcagag
tcagaagatgagtgggaacgaactgagagggagcgacttcaggacctggaggaacgtgat
gcctttgctgaacgtgtacgaaaacgggataaggagcgaacacggaacattttggagcgg
tctgacaagaaggcatatgaggaagcccagaaacgtcttaagatggctgaagaagatcag
aaagcaatggtacctgagctccgaaagaaatctaggagagaataccttgcaaaacgagaa
cgtgagaagctggaagatctagaggcagagctggcagatgaagaatttctatttggagat
gtggaactgagccacaccgaacggcaagaactcaaatataagaagagagtacgggatctg
gctcgggagtaccgggcagctggggagcaagagaagttggaggcaacaactcggtatcac
atgccagaagaaactcgtggacagccaactcgtgggatagagttggtggaagaagagtca
ggagcccctggagaagagcagaggcgctgggaggaggcccgtttaggggcagctttcctc
cgatttggagctaaggatgctgccctctctgaacccaagtatcagttggtgctagaagag
gaggaaaccattgaatttgtccgagctacccggctccagggtgatgaggaaccatcagct
ccacccccttcatctggggaccaacagaaagaatcaattcgggctgtcagacatagcctt
cctgttttccccttccgaaatgacctccttgatgccattgccaaccatcaggtcctcatc
attgaaggtgaaacagggtcagggaagactacacagatccctcaatacctctttgaggag
ggttacacacagaggggaatgaagattgcctgcacccagcctcggagagtggcagccatg
agtgtggcagctagagtggcccgggagatgggggtgaagctaggaaatgaggttggctat
agtatccgctttgaggactgcacctcagaacgaactgttctcagatacatgactgatggg
atgcttcttcgagaatttctttctgagcctgaccttggaagttacagcgtggtgatgatt
gatgaagctcatgaacggactctacacacagacatactatttgggttgatcaaggatgtt
gctcgattccgccctgaactcaaagttctggtagcatccgctaccctggatactgctcga
ttttcagccttctttgatgatgcccctgttttccggatccctggacgcaggtttcctgtt
gacatcttctatacgaaggctccagaggcagattacttagaagcctgtgtggtgtctgtg
ctgcagatccatgtcactcaacctcctggggacatcctggtatttctgactggacaggaa
gaaattgaagcagcttgtgagatgctacaggatcgctgccgtcgcttgggatcaaagatc
cgggagctgttggtgctgcccatttatgcaaacctgccttctgacatgcaagctcgaatc
ttccagccaacaccccttggggcacgcaaggtggtggtggcaacaaacattgcagagaca
tcactgaccattgagggcattatttatgttttggaccctggtttctgcaaacaaaagagc
tataacccaagaactggcatggaatcccttacagtcactccctgtagcaaggcctcagct
aatcagcgagctggccgtgcaggtcgggtggctgcagggaagtgcttccgcctttacaca
gcctgggcctatcagcatgagctagaggagaccacagtgccagagatccagaggaccagc
ttaggcaatgttgtcctgttgcttaagagtctgggaatccatgatttaatgcactttgac
tttctggatcccccaccctacgagaccctgctgctggctctggaacagttatatgctctg
ggagcacttaaccacctaggggagctcaccacgccgggccgaaagatggcagaactgcct
gtggaccctatgttatctaagatgattctggcatctgagaagtatggctgttcagaggaa
attcttacagtggctgccatgctgtctgtcaataactccatcttttaccgtccaaaggac
aaagttgtccatgctgataatgcccgggttaacttcttcctgcctggtggggaccacttg
gtgctactaaatgtttatacacagtgggttgagagtggttattcttcccagtggtgctat
gagaactttgtgcagttgcgttcactgcgtcgagcccgggatgtacgagaacagctagag
ggcctcctagaacgtgtagaagttgggctcagctcctgccaaggggattatattcgtgtc
cgtaaggctatcactgctggctacttctaccacacagcacgactgactcgaagtgggtac
cgcacagtgaagcagcaacaaactgttttcattcatcccaactcctctctttttgaggag
cagccccgttggctactttaccatgagcttgttttgacaaccaaggagtttatgagacag
gtgctagaaattgaaagtggttggctcctagaagtggctccgcactactacaaggcccga
gagcttgaagaccctaatgccaagaaaatgcccaaaaaagtgggcaagacccgggaggaa
ctgggttag
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