KEGG   Methylomicrobium lacus: ACEPPP_00040
Entry
ACEPPP_00040      CDS       T10917                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
mlau  Methylomicrobium lacus
Pathway
mlau03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mlau00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ACEPPP_00040 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlau03019]
    ACEPPP_00040 (rnc)
   03009 Ribosome biogenesis [BR:mlau03009]
    ACEPPP_00040 (rnc)
   03036 Chromosome and associated proteins [BR:mlau03036]
    ACEPPP_00040 (rnc)
Enzymes [BR:mlau01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ACEPPP_00040 (rnc)
Messenger RNA biogenesis [BR:mlau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACEPPP_00040 (rnc)
Ribosome biogenesis [BR:mlau03009]
 Eukaryotic type
  90S particles
   RNase
    ACEPPP_00040 (rnc)
 Prokaryotic type
  rRNA processing factors
   ACEPPP_00040 (rnc)
Chromosome and associated proteins [BR:mlau03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ACEPPP_00040 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: XGK39678
LinkDB
Position
12432..13115
AA seq 227 aa
MIRDPKILSAKLGLTFNNPDLFLMALTHRSAGAKNNERLEFLGDSILGFVIAEVLYDKFP
GAPEGVLSRLRANLVNQGSLAELAREHRFGDYLLLGSGELKSGGFRRESILSDALEAVIG
ALYLDQGIDVCKQWIKGLFQQKVQALSLDNWQKDPKTQLQELMQSKKIDLPEYTLLTMSG
LPHEQTFKVKCTIPLLKDPCIGTGVSRKRAEQAAAEKILQLLEKKDQ
NT seq 684 nt   +upstreamnt  +downstreamnt
gtgattagggacccgaagatcttgtccgctaagttggggctaacgttcaacaaccccgac
ctttttttgatggcgctgacgcatcgcagcgccggcgcgaaaaacaacgaacgcctggag
tttttaggcgattcgattttgggcttcgtgatcgccgaagttttatatgacaaatttccc
ggggctcccgaaggcgtactgagcaggctgcgggcgaatctggtcaatcagggctctctg
gccgaactggcgcgcgaacatcgcttcggcgattacctcctcttgggttccggcgaattg
aaaagcggcggtttccggcgcgagtcgattctgtcggatgcgctggaggcggtgatcggc
gccttgtatctcgatcagggtatcgatgtgtgcaagcaatggatcaaggggctgtttcag
caaaaagtccaagccttgtcgctggataattggcagaaagatccgaaaacgcagctgcag
gaactgatgcagtcgaaaaagatcgatctgcccgaatatacgctgctgaccatgtccggt
ctaccgcacgaacaaaccttcaaagtcaaatgcacgatcccgctgctgaaggatccgtgt
atcggcaccggcgtctcgcgaaagcgcgcggaacaggcggcggcagaaaaaatactgcaa
ttactggagaaaaaagatcaatga

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