Methylomicrobium lacus: ACEPPP_00095
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Entry
ACEPPP_00095 CDS
T10917
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mlau Methylomicrobium lacus
Pathway
mlau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACEPPP_00095 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlau03400
]
ACEPPP_00095 (xseA)
Enzymes [BR:
mlau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACEPPP_00095 (xseA)
DNA repair and recombination proteins [BR:
mlau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACEPPP_00095 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Sulfotransfer_4
RecJ_OB
Orai-1
Motif
Other DBs
NCBI-ProteinID:
XGK39689
LinkDB
All DBs
Position
complement(22991..24334)
Genome browser
AA seq
447 aa
AA seq
DB search
MNKTNTPPKIYTVSELNREAALALGEHFLMIWVEGEISNLSAPSSGHLYFSLKDAGAQVR
CALFKNQQRGLRCKPANGMQVLLRAEVSLYEPRGDYQLIVERMEAAGDGALRRAFDALRL
KLSEEGLFDASGKKSLPRLPQAIGIITSPTGAALRDILSVLKRRFPAIPVIVYPTAVQGA
NAKFEVAEAIQTANRHADCDVLILARGGGSLEDLQAFNEEIVAREIAASAIPIISGIGHE
TDVTIADFAADLRAATPTAAAEHATPDQQQWLHGFMQYEKRLEQCWQRKLIRTRQSLDWL
DKRLAQQHPGQKLRRNAQRLDELKLRLTQGMLKKQQHQKHLLAAANARLAQFNPAVRILS
YQHRQQYLARRLERAMQHKLEQSRLRLSNTSQTLHAVSPLATLNRGYALVTMVENGKIVR
SVQQLAVGDRIQTRIADGQFVSEIVDL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccaacaccccgcccaagatttatacggtctccgagctgaaccgcgaggcc
gcgctggcgctcggcgagcattttctgatgatctgggtcgaaggcgaaatctcgaacctc
agcgcgccctcgtccggccatctgtatttttcgttgaaggacgccggcgcccaggtgcgc
tgcgcgctgttcaaaaaccagcagcgtgggctgcgctgcaaacccgcgaacggcatgcag
gttttgcttcgggccgaggtcagcctgtacgagccgcgcggcgattatcaattgattgtc
gaacggatggaggcggcgggcgacggcgcgctgcggcgcgctttcgacgcgttgcggctg
aaattgtccgaggaaggccttttcgatgcctccggcaaaaaaagcctgccgcgcctgccc
caggcgatcggcatcattacctcgccgaccggggccgcgctacgggacatactcagcgta
ttgaagcggcgctttccggcgatcccggtgatcgtgtacccgaccgccgtgcaaggcgcc
aatgccaaattcgaagtggccgaggcaatccaaaccgcgaaccggcacgcggattgcgat
gtcctgatcctggcgcgcggcggcggctcgctcgaagacctgcaggccttcaatgaagaa
atcgtcgcgcgcgagatcgccgcgagcgctattccgatcatctccggcatcggccacgaa
accgatgtcacgatcgccgatttcgcggcggacctgcgcgccgcgacgccgaccgcggcg
gccgaacacgccacgccggatcagcagcaatggttgcacggcttcatgcagtacgagaaa
cgtctcgaacaatgctggcagcgcaaactgatcagaacccggcagagcctggactggctg
gacaagcgccttgcgcagcagcatcccggccaaaaactgcggcgcaatgcacagcgactg
gacgaattgaagttacgcttgacgcaaggcatgctgaaaaaacagcagcatcagaaacac
ttgctcgccgccgccaacgccagattagcgcagttcaacccggccgtccggatacttagc
taccaacatcggcaacaatacctcgcgcggcgcctggagcgggcgatgcaacacaagctg
gagcagagccggctcagactgtcgaacaccagccagaccctgcacgcggtcagtccgctc
gcgacattgaaccggggctatgcgctggtaacgatggtcgagaacggtaaaatcgtccgc
tccgtgcagcaacttgcagtcggcgacaggattcagacgcggatcgccgacgggcaattc
gtcagcgaaatcgttgatctgtaa
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