Methylomicrobium lacus: ACEPPP_00615
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Entry
ACEPPP_00615 CDS
T10917
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mlau Methylomicrobium lacus
Pathway
mlau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEPPP_00615 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlau03400
]
ACEPPP_00615 (uvrB)
DNA repair and recombination proteins [BR:
mlau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEPPP_00615 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACEPPP_00615 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HEM4
Orbi_NS3
DUF87
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
XGK39788
LinkDB
All DBs
Position
155774..157783
Genome browser
AA seq
669 aa
AA seq
DB search
MKKEFKIHSRFQPAGDQPAAIAKLIEGLNDGEVHQTLLGVTGSGKTFTIANVIQKVQRPA
MVMAPNKTLAAQLYGEFKEFFPENSVEYFVSYYDYYQPEAYVPASDTFIDKDASLNEHIE
QMRLSATKALIEREDTIVVATVSAIYGLGEPESYFKMVLHLVKGDLIDQRAIIRRLTEMQ
YTRNDVDLRRATYRVRGDVIDIYPAESDSQALRVELFDDEVERLSLFDPLTGEILRHVAR
YTVYPKNHYVTPREQLLEAVDKIKVELKERLEQLRALNKLVEAQRLEQRTLFDIEMIMEM
GYCSGIENYSRYLSGRGPGEPPPTMFDYLPANAIIVLDESHVTVPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPLTFDEFELKSPQRIYVSATPGPYEKTHSGVFVDQVVRPTGLLDP
EVEVRPATTQVDDLLSEINKRVDKQERVLVTTLTKRMAEDLTEYLTDHGIRVRYLHSDVE
TVERVEIIRDLRLGQFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSTVSLVQTIGR
VARNVHGRAILYADRITKSMQQAMEETERRREKQRSFNEAHGITPATVYKSVTDILQTAI
PGAGLAIPSTQKRVAEPSASYIKPLTQKQLAKKIKQLEEAMYKHAKDLEFEQAAKIRDEL
KLLQEQVLV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaagaatttaagatccacagccgcttccagccggccggtgaccagcctgccgcg
atcgcaaaactgattgaaggcctgaacgacggcgaagtgcatcagaccctgctcggcgtg
accggctcgggcaagacctttacgatcgcgaacgtgatccagaaggtccagcgcccggcg
atggtgatggcgccgaacaaaacgctggccgcgcagctttacggcgagttcaaggagttt
tttccggaaaacagcgtcgaatatttcgtttcctattacgactactaccagccggaagcc
tatgtgccggcgtcagacaccttcatcgacaaggacgcctcgctgaacgaacacatcgag
cagatgcggttgtccgcgaccaaggcgctgatcgaacgcgaggatacgatcgtcgtggcg
accgtgtccgcgatctacggcttgggcgagccggaatcctacttcaagatggtcttgcat
ctggtcaagggcgacctgatcgatcagcgcgcgatcattcgccggctgaccgaaatgcaa
tacacccgcaacgacgtcgacctcaggcgcgcgacctaccgggtgcgcggcgacgtgatc
gacatttatccggccgaatcggactcgcaagcgctgcgggtcgaactgttcgacgacgag
gtcgaacgcctgtcgctgttcgatcccttgaccggcgaaatcctgcgccatgtcgcgcgc
tatactgtctatccgaagaatcactacgtgacgccgcgcgaacaattactggaagcggtc
gacaagatcaaggtcgaattgaaagagcgcctggagcagctgcgcgcgctgaacaaactg
gtcgaggcgcagcgcctggaacagcgcacgctgttcgacatcgagatgatcatggagatg
ggctactgttccggcatcgaaaactattcgcgctatctgtccggccgcgggcccggcgaa
ccgccgccgacgatgttcgattacctgcccgcgaacgcgatcatcgtgctcgacgaaagc
catgtcacggtcccgcaaatcggcgcgatgtacaagggcgaccgttcgcgcaaggaaacc
ctggtcgaatacggattccggctgccgtccgcgctcgacaaccggccgttgaccttcgac
gagttcgagctgaaatcgccgcagcggatttacgtttcggcgacgcccgggccttacgaa
aagacgcattctggcgtcttcgtcgatcaggtggtgcggccgaccggcctgctcgatccg
gaagtcgaggtgcgcccggccacgacgcaggtcgacgatctcttgtccgaaatcaacaaa
cgcgtcgataagcaggaacgggtcctggtcacgacattgaccaaacgcatggccgaggat
ttgaccgaatacctgaccgaccacggcatccgtgtgcgctacctgcattccgacgtcgaa
acggtcgagcgcgtcgagatcatccgcgacctgcgcctcggccagttcgacgtgctggtc
ggcatcaacctgctgcgcgaaggcctggacattccggaagtctctttggtcgcgatcctc
gatgcggacaaggaaggcttcctgcgctcgaccgtgtcgctggtgcagacgatcggccgc
gtcgcccgcaacgtgcacggcagggcgatcctgtacgcggaccggatcaccaaatcgatg
cagcaggcgatggaggaaaccgagcgccgccgcgaaaagcagcgcagcttcaacgaagcg
catgggataacgccggcgaccgtctataaatcggtcaccgacatcctgcagaccgcgatc
cccggcgccggcctggcgatcccgagcacgcaaaaacgcgtcgccgagccgtccgcgtct
tacattaagccattgacgcaaaagcaactggcgaaaaaaatcaaacagctcgaggaagcg
atgtacaagcatgcgaaggatctggagttcgagcaggcggcgaaaatccgcgacgagctg
aagttgctgcaagagcaggtgctggtataa
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integrated database retrieval system
