Methylomicrobium lacus: ACEPPP_06570
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Entry
ACEPPP_06570 CDS
T10917
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mlau Methylomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlau03016
]
ACEPPP_06570 (truB)
Enzymes [BR:
mlau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACEPPP_06570 (truB)
Transfer RNA biogenesis [BR:
mlau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACEPPP_06570 (truB)
Prokaryotic type
ACEPPP_06570 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XGK40914
LinkDB
All DBs
Position
complement(1501497..1502399)
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AA seq
300 aa
AA seq
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MSKRANRRNVHGILLLDKRLGVSSNQALQEVKRLLNAAKAGHTGSLDPLATGLLPLCFGE
ATKVSAMMLDDDKRYRVVIRLGVLTDTGDAEGAVLETKPVPEISQAMLDDCLKRFTGELD
QVPPMYSALKLNGRKLYELAREGKTVERKARRITIYALRQLDFEGDRLTLEVFCSKGTYI
RSLAEDIGTHFGCGATVAELRRLQAGMFDLGQAVTIEQLRAMDADQLDACLLNVDMPLQA
LPAVELQDVDAGRIRNGQAVNAESSGAGQVRLYHAGAFLGLGEMRMDGKLAPCRLFNLAE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgcgcaaaccggcgcaatgtgcacggcatattgctgctggataaacgcctc
ggcgtatcttcgaatcaggccttgcaggaagtcaagcgcttgctgaatgccgcgaaagcc
ggtcataccggcagcctcgatcccttggcgacggggctattgcccttgtgtttcggcgag
gcgaccaaggtatccgccatgatgctcgatgacgacaagcgctaccgggtcgtgatccgg
ctcggcgtgttgaccgataccggcgatgccgaaggcgcggtgctggaaacgaaaccggtg
ccggagatcagccaggcgatgctcgatgactgtctcaaacgcttcaccggcgagctcgat
caggtgccgccgatgtactcggcgctgaaactgaacggcaggaagctgtacgaactggcg
cgcgaaggcaagacggtcgaacgcaaggcgcggcggatcacgatctacgcactgaggcag
ctcgatttcgagggcgaccggctgacgctggaagtgttctgttcgaaaggcacctacatc
cgctcgctcgcggaagacatcggaacccatttcggctgcggcgcgacggtcgcagaactg
cggcgcctgcaggcgggcatgttcgatctcggccaggcggtcacgatcgaacaattgcgc
gcgatggacgcggatcaactcgatgcctgtttgctgaatgtcgatatgccgttacaggcg
ctgccggcggtcgaattgcaggatgtcgatgccggcaggatcagaaacggacaagcggtt
aatgccgaatcgtccggggcagggcaggtgcgcctgtaccatgccggcgcgtttttaggc
ttgggcgaaatgcgaatggatggtaaactagccccttgcagattgttcaatttggccgaa
taa
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