Methylomicrobium lacus: ACEPPP_07455
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Entry
ACEPPP_07455 CDS
T10917
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mlau Methylomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlau03009
]
ACEPPP_07455 (dbpA)
Enzymes [BR:
mlau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACEPPP_07455 (dbpA)
Ribosome biogenesis [BR:
mlau03009
]
Prokaryotic type
rRNA helicases
ACEPPP_07455 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
CMS1
MurB_C
Motif
Other DBs
NCBI-ProteinID:
XGK41073
LinkDB
All DBs
Position
1706907..1708289
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AA seq
460 aa
AA seq
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MSASNFPDLLSTALRANLDSLGYLHMTPIQQASLPAILKGQDLIAQAKTGSGKTVAFGIG
LLTRLDPQDYQVQALILCPTRELADQVSKEIRRLARFIPNIKLLSLCGGTPIRPQYESLQ
QHSPHIVVGTPGRIQQHLDKGTLNPDRINTLVLDEADRMLDMGFYDDIIKIIKATPKDRQ
TLLFSATYPDEIKKMSAGIQKNPVEIKVEITHRDNPIEQLFFEISHAERSKHLVTLLAHY
RPESAVIFCNTKAQCQEVADELEKHGQHALVLNGDLEQKDRDRVLLLFTNKSCPLLIATD
VAARGLDIKDLEAVINYEIPYEPEVYIHRIGRTGRAGKEGLALSLYSSRDAHRVNAIEDY
QQHPVTFVDIATLQPATRVELTAPMITLCIDGGRKSKIRPGDILGALTGAAGIEGKYVGK
IDITDNHAYVAIERGMANQAVKQLAEGTIKGRKLRVWKVS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcatccaatttccccgatttattaagcaccgccctgcgcgccaatctcgattcg
ctcggctacctgcacatgacgccgattcaacaagccagcctgcccgccatcttaaaaggc
caggatttgatcgcccaggccaagaccgggagcggcaaaaccgtcgctttcggcatcggc
ctgttaacccggctcgatccgcaggattaccaggtccaggcgctgatcctctgcccgacc
cgcgagctggccgatcaggtcagcaaggaaatccgccgtctggcccgcttcatccccaac
atcaaattactgagcctgtgcggcggcacgccgattcgcccgcaatacgagtcgctgcaa
cagcacagtccgcatatcgtggtcggcacgccggggcggattcaacagcatctggacaaa
ggcaccctgaatcctgaccggatcaacacgctggtgctggatgaagccgaccgcatgctg
gacatgggtttttacgacgacatcatcaagatcatcaaggccacgccgaaagaccggcaa
acactgttattctcggcgacctatcctgacgaaatcaagaaaatgagcgccggcatccaa
aaaaatccggtcgaaatcaaagtcgaaatcacgcaccgcgacaatccgatcgagcaattg
ttttttgaaatcagccatgcggaaagaagcaagcatttagtcacgttgctggcccattac
cgccccgaatcggcggtgattttctgtaataccaaagcccagtgccaagaggtcgcggac
gaactcgaaaaacacggccagcatgccttggtattgaacggcgatctggaacaaaaagac
cgcgaccgggtgttattgctgttcaccaacaaaagctgcccgctgttgatcgccaccgac
gtcgccgcgcgcggcctggatatcaaggacttggaggcggtgatcaattacgagatcccc
tacgaaccggaggtctatatccaccgtatcggccgcaccggcagagccggcaaggaagga
ctggcgctgagcctgtatagttcccgagatgctcatcgcgtcaacgcgatcgaggattat
cagcagcatccggtcactttcgttgacatcgccaccttgcaaccggccaccagggtagaa
ctcacggcgccgatgatcaccctttgcatcgacggcggacgcaaaagcaaaatccggccc
ggcgatatactcggcgcattgaccggcgcggcggggattgaaggcaaatatgtcggcaaa
atcgatattaccgataatcacgcttacgtcgcgattgagcggggcatggccaatcaggcg
gtcaagcaattggcggaggggacgattaaggggcgtaagcttagggtttggaaggttagt
tga
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