Methylomicrobium lacus: ACEPPP_10525
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Entry
ACEPPP_10525 CDS
T10917
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlau Methylomicrobium lacus
Pathway
mlau03420
Nucleotide excision repair
mlau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEPPP_10525 (uvrD)
03430 Mismatch repair
ACEPPP_10525 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlau03400
]
ACEPPP_10525 (uvrD)
Enzymes [BR:
mlau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEPPP_10525 (uvrD)
DNA repair and recombination proteins [BR:
mlau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEPPP_10525 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACEPPP_10525 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XGK37959
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All DBs
Position
2403294..2405471
Genome browser
AA seq
725 aa
AA seq
DB search
MIDVTDLLDPLNDAQRQAVTAPSQAMLVLAGAGSGKTRVLVHRIVWQIQVQGVSPHGILA
VTFTNKAAREMRGRIEELLQRPTHNLWIGTFHGLAHRLLRRHARQAKLPETFQVMDSADQ
LRVIKRILQALNLDEAKWPPKQVQWFINAQKDEGVRARHMPETGDLYMRQMIAIYRAYEE
LCDRSGLVDFAELLLRAHELLRDNPDVLSFYQERFQQVHVDEFQDTNTIQYAWLRLLTQD
KNNLFVVGDDDQSIYGWRGARIENIYSFQKHFPGHEVIKLEQNYRSTGNILKAANQVIAH
NEGRLGKELWTEAGEGEPISLYAAFNEQDEAFFVIERIRAWIKEGGARADTAILYRSNAQ
SRQFEERLVQAGIPYRVYGGLRFFERAEIKNALAYLRLIANRDDDVSFERVVNTPTRGIG
AKTVDDLRVIARDRGTSLWRAARIMLEHGMLSARAGNALAGFMQLVDRMAAETEGMELFE
QVKRTVEKSGLIEFYQNSKGEQGEEKVENLEELVNAARLFDPAIDNEDNLGPLELFLAHA
ALEAGEMQGEDFDDCVQLMTLHSAKGLEFKVVFMVGMEEGLFPSLQSVEDPKRLEEERRL
CYVGMTRAMQTLYMTYAESRRLYGRENYPRPSRFLREIPAEYLQEVRLRAQVSRPAAATP
LKTAASASLSVSQYKLGQRVSHAKFGEGVILQLEGQGAQERAQINFKAAGVKWLMLAYAG
LAALP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgtcaccgacctactcgaccccttgaacgatgcccagcgccaggcggtcacc
gcgccctcgcaggcgatgctggttttggccggcgccggcagcggcaagacccgcgtgctg
gtgcaccggatcgtctggcagatccaggtgcagggcgtctcgccgcacggcattctggcg
gtcaccttcacgaacaaggccgcccgcgaaatgcgcggacgcatcgaggaactcttgcag
cggccgacccacaatctgtggatcggcaccttccacggcctcgcgcaccgcctgctgaga
cgccacgcgcgccaggcgaagctgccggaaacctttcaggtgatggatagcgccgatcag
ctcagggtgatcaagcgcatcctgcaggcgttgaacctcgacgaggccaaatggccgccg
aaacaggtgcaatggttcatcaacgcgcagaaggacgagggcgtccgcgcccgccacatg
ccggagaccggcgatctgtatatgcggcagatgatcgcgatctaccgcgcctacgaggaa
ttgtgcgaccgctccggcctggtcgatttcgcggagcttttgctgagagcccacgaactc
ctgcgcgacaatccggacgtcttgtccttctatcaagaacgctttcaacaggtgcatgtg
gacgagttccaggacaccaatacgatccagtatgcctggctgcgccttctgacccaggac
aaaaacaacctgttcgtggtcggcgacgacgaccagtcgatctacggctggcgcggcgcc
cgaatcgaaaacatctacagcttccagaagcatttccccggtcacgaagtcatcaagctc
gaacagaactaccgctcgaccggcaacatcctgaaagcggcgaatcaggtgatcgcgcac
aacgaaggccggctcggcaaggaactgtggaccgaagcgggcgaaggcgagccgatctcg
ctgtatgcggccttcaacgaacaggacgaagcgtttttcgtgatcgagcgcatccgcgcc
tggatcaaggaaggcggcgcgcgcgcagataccgcgatcctgtaccgctcgaacgcgcag
tcccgccaattcgaggaacggctggtgcaggccggcattccctaccgcgtctacggcggt
ctgcgcttcttcgaacgcgccgaaatcaagaacgcgctggcctatctccggctgatcgcg
aaccgcgacgacgacgtctcgttcgaacgggtcgtgaacaccccgacccgcggcatcggc
gcgaaaacggtcgacgacctccgcgtgatcgcgcgcgatcgcggcacctccttatggcgc
gccgccaggatcatgctcgaacacggcatgttgagcgcccgcgcgggcaacgcgctggcc
gggttcatgcagctggtcgaccgtatggccgccgaaaccgagggcatggaactgttcgaa
caggtcaaacggaccgtcgagaaatccggactgatcgagttctatcagaacagcaagggc
gaacagggcgaggagaaagtcgaaaacctcgaggaactggtcaacgccgcgcgcctgttc
gacccggctatcgacaatgaagacaacctcggcccgctcgaactgttcctggcgcatgcc
gcgctcgaggccggagagatgcagggcgaggacttcgacgactgcgtgcagctgatgacc
ctgcattcggccaagggcctcgaattcaaggtcgtgttcatggtcggcatggaagaaggc
ctgttcccgtcgctgcaatcggtcgaggatcccaaacgcctcgaagaagaacgccggctg
tgctatgtcggcatgacgcgggcgatgcagactttatacatgacctacgccgaatcccgg
cgcctgtacggacgcgaaaactatccgcggccctccaggtttctgcgcgaaattccggcc
gaatacctccaggaagttcgcctccgcgcccaggtcagccgtccggccgcggcaacaccc
cttaaaacagcggcatccgcctcgctctcggtcagccaatataaactcggccagcgcgtc
agccatgcgaagttcggcgaaggcgtgatcctgcaactcgaaggccagggcgcgcaggaa
cgcgcgcagatcaatttcaaggccgcgggagtcaaatggctgatgctggcttatgcagga
ttggcggccttgccctga
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