KEGG   Methylomicrobium lacus: ACEPPP_10915
Entry
ACEPPP_10915      CDS       T10917                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mlau  Methylomicrobium lacus
Pathway
mlau02020  Two-component system
mlau02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mlau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACEPPP_10915
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ACEPPP_10915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlau03021]
    ACEPPP_10915
Transcription machinery [BR:mlau03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACEPPP_10915
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: XGK38036
LinkDB
Position
2482578..2484026
AA seq 482 aa
MKQSLHFKLGQQMTMTPQLQQAIRLLQMSTLDLQQEIEQALESNMMLELGEDEHAAPALE
PMPEKKIDTSDTATSEGSQTDIPDELPLDSSWEDIFDATPEWSGNDNADDSDFETQRSKS
STLLDHLLWQVDLTKFSERDHAIALAIIDSINEEGYLTSGIEDIFEGLQDQIDDLDFDEV
NAVLHRIQHFDPPGIAAVDLSDSLRLQLEQLPEDTPYRGDALRIVTQHLDLLAAQERNKL
MRKLNLGEQQLSAAVALIRTLDPKPGAKIQETETNYVIPDVYVAKKNGRWQVNLNPDIAP
KLRINPYYSTLIKRADDSKDNVCMKDHLQEARWFIKSLNSRNDTLLRVARSIVEKQTGFL
EHGSIAMKPMVLKEIAEELELHESTISRVTTQKYMHTPRGIFEFKYFFSSHVSTEGGGEC
SSTAIRAFIKELISNENPAKPLSDSKIAELLQEKGIQVARRTIAKYREAMLIASSSERKR
IM
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaacagtcgctccatttcaaactcggccagcaaatgacgatgacgccgcaattgcag
caggcgatccgtctgttgcagatgtcgacgctcgatttgcagcaggaaatcgaacaggcg
ctcgaatcgaacatgatgctggaactcggcgaagacgagcatgccgcgccggcgctggaa
ccaatgccggaaaaaaagatcgacacctcggacacggcgaccagcgaaggctcgcaaacc
gatattccggacgaattgccgctcgattcttcctgggaagacatcttcgacgcgacgccc
gaatggagcggtaatgacaacgccgacgactccgattttgaaacccaacgcagcaaatcc
tcgaccctgctcgatcatcttttgtggcaggtcgatctgaccaaattcagcgagcgcgac
catgcgattgcgctcgcgatcatcgattcgatcaacgaagagggctacctgacctccggc
atcgaggatatattcgaaggcctgcaagaccagatcgacgatctcgatttcgacgaagtc
aatgcggtgctgcaccggattcaacatttcgacccgcccggcattgcggcggtcgacctg
tccgacagcctgcgtctgcaacttgagcagcttcccgaagacacgccttaccgcggcgac
gccttgcgcatcgtgacccaacacctggatttgttggcggcgcaggagcgcaacaaactg
atgcgtaaattgaatctcggcgaacagcagctcagcgccgcggtcgccctgatccgaacg
ctcgacccgaagcccggcgccaagatccaggagaccgaaaccaactatgtgattccggat
gtctatgtcgccaaaaagaacggccgctggcaggtcaacctgaatccggacatcgcgccg
aaactgcgcatcaatccgtattattcgacgctgatcaaacgcgcggacgacagcaaggac
aacgtctgcatgaaggaccatctgcaggaagcgcgctggttcatcaagagcctgaacagc
cgcaacgacacgctgctgcgggtcgcccgcagcatcgtcgagaagcagaccggctttctc
gagcacggctcgatcgcgatgaagccgatggtgctgaaggaaatcgccgaggaactcgaa
ctgcacgagtcgaccatctcgcgggtcacgacgcaaaaatacatgcataccccgcgcggc
atcttcgaattcaaatacttcttttccagccacgtctcgaccgaaggcggcggcgaatgc
tcgtcaaccgcgatccgcgcattcatcaaggaactgatcagcaatgaaaatccggcaaaa
ccgctcagtgatagtaaaatagccgaactgctgcaagaaaagggcattcaggttgcccgc
agaaccattgcgaaatatcgcgaagccatgctgatcgcctcgtcaagcgaaagaaaacgc
atcatgtag

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