Methylomicrobium lacus: ACEPPP_10915
Help
Entry
ACEPPP_10915 CDS
T10917
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mlau Methylomicrobium lacus
Pathway
mlau02020
Two-component system
mlau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACEPPP_10915
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACEPPP_10915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlau03021
]
ACEPPP_10915
Transcription machinery [BR:
mlau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACEPPP_10915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
XGK38036
LinkDB
All DBs
Position
2482578..2484026
Genome browser
AA seq
482 aa
AA seq
DB search
MKQSLHFKLGQQMTMTPQLQQAIRLLQMSTLDLQQEIEQALESNMMLELGEDEHAAPALE
PMPEKKIDTSDTATSEGSQTDIPDELPLDSSWEDIFDATPEWSGNDNADDSDFETQRSKS
STLLDHLLWQVDLTKFSERDHAIALAIIDSINEEGYLTSGIEDIFEGLQDQIDDLDFDEV
NAVLHRIQHFDPPGIAAVDLSDSLRLQLEQLPEDTPYRGDALRIVTQHLDLLAAQERNKL
MRKLNLGEQQLSAAVALIRTLDPKPGAKIQETETNYVIPDVYVAKKNGRWQVNLNPDIAP
KLRINPYYSTLIKRADDSKDNVCMKDHLQEARWFIKSLNSRNDTLLRVARSIVEKQTGFL
EHGSIAMKPMVLKEIAEELELHESTISRVTTQKYMHTPRGIFEFKYFFSSHVSTEGGGEC
SSTAIRAFIKELISNENPAKPLSDSKIAELLQEKGIQVARRTIAKYREAMLIASSSERKR
IM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcgctccatttcaaactcggccagcaaatgacgatgacgccgcaattgcag
caggcgatccgtctgttgcagatgtcgacgctcgatttgcagcaggaaatcgaacaggcg
ctcgaatcgaacatgatgctggaactcggcgaagacgagcatgccgcgccggcgctggaa
ccaatgccggaaaaaaagatcgacacctcggacacggcgaccagcgaaggctcgcaaacc
gatattccggacgaattgccgctcgattcttcctgggaagacatcttcgacgcgacgccc
gaatggagcggtaatgacaacgccgacgactccgattttgaaacccaacgcagcaaatcc
tcgaccctgctcgatcatcttttgtggcaggtcgatctgaccaaattcagcgagcgcgac
catgcgattgcgctcgcgatcatcgattcgatcaacgaagagggctacctgacctccggc
atcgaggatatattcgaaggcctgcaagaccagatcgacgatctcgatttcgacgaagtc
aatgcggtgctgcaccggattcaacatttcgacccgcccggcattgcggcggtcgacctg
tccgacagcctgcgtctgcaacttgagcagcttcccgaagacacgccttaccgcggcgac
gccttgcgcatcgtgacccaacacctggatttgttggcggcgcaggagcgcaacaaactg
atgcgtaaattgaatctcggcgaacagcagctcagcgccgcggtcgccctgatccgaacg
ctcgacccgaagcccggcgccaagatccaggagaccgaaaccaactatgtgattccggat
gtctatgtcgccaaaaagaacggccgctggcaggtcaacctgaatccggacatcgcgccg
aaactgcgcatcaatccgtattattcgacgctgatcaaacgcgcggacgacagcaaggac
aacgtctgcatgaaggaccatctgcaggaagcgcgctggttcatcaagagcctgaacagc
cgcaacgacacgctgctgcgggtcgcccgcagcatcgtcgagaagcagaccggctttctc
gagcacggctcgatcgcgatgaagccgatggtgctgaaggaaatcgccgaggaactcgaa
ctgcacgagtcgaccatctcgcgggtcacgacgcaaaaatacatgcataccccgcgcggc
atcttcgaattcaaatacttcttttccagccacgtctcgaccgaaggcggcggcgaatgc
tcgtcaaccgcgatccgcgcattcatcaaggaactgatcagcaatgaaaatccggcaaaa
ccgctcagtgatagtaaaatagccgaactgctgcaagaaaagggcattcaggttgcccgc
agaaccattgcgaaatatcgcgaagccatgctgatcgcctcgtcaagcgaaagaaaacgc
atcatgtag
DBGET
integrated database retrieval system