Methylomicrobium lacus: ACEPPP_14645
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Entry
ACEPPP_14645 CDS
T10917
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mlau Methylomicrobium lacus
Brite
Transcription machinery [BR:
mlau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACEPPP_14645 (rapA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGK38740
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Position
complement(3285586..3288405)
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AA seq
939 aa
AA seq
DB search
MENFIPGQRWISNTESELGLGLILEAAYNRVTVLFLATGEKRIYASDNSPLTRVKFSVGD
TIEAIDGAKITVHHLVENNGLITYIGKNKAGLEVRLEEMELNHHIQFNKPQDRLFTGQFD
PPSWFSLRYETWRRLREHHQSPVKGLMGGRTSLIAHQIYIAHECANRLAPRIMLADEVGL
GKTIEAGMILHHRLINGLSSRILIIVPETLLHQWLVEMLRRFNLRFSIIDEERCRNVNLE
NELADDEAGEEPGENEDVFVNEQLVLCSQSFFSRYPNRQRQALEAGWDMVIVDEAHHLEW
SEDHPSPEYLFIEQLGLQTPSLILLTATPEQLGKLSHFARLRLLDPDRFYSYSRYLEDEH
LFEPVAKAAQALLAERTLTEESAAALRALVKDDNVEGLLKNLSHPEKSAHARAQLINVLL
DHHGTGRILFRNSRHTVQGFPDRERYGYALEGRENRDDLEQDPRFAWLVDTIRQFAGDKA
LLICKEAQTAIDLEETLRNRTGIAAAVFHEGMTIIERDRAAAYFADQESSARLLICSEIG
SEGRNFQFVHQLILWDLPANPDLLQQRIGRLDRIGQKHIIRIHVPYLRGSEQELLFRWYD
EGLNVFRHNNTAAQHVADELAGELSSLLAARDFAPLDAFIAHTRERSAAIEAELHQGRDQ
LLELNSCRKEVADQYIDALQRHERQSHLWQYMEDVFESYGVDTEFHSLDCFIIKPSEHLR
ISHFPNLPEDGMTITIDRSIALAREDFQFLTMEHPMVLGAMDLVISSETGNASINVIKHP
SLKAGQFLLECLFVVECSAPPELQLGRFLPHTPIRVLIDQNKQDLTDTIDHDDLIDAGVN
FDKSKIVTFINNQRNHLNQMLGAAEHRAKTDMQTLVQDATRAMLESLAEEIKRMMRLQKV
NPSIKPEEIEHLKEMTMLAHDNIESAELKLDAVRFIITN
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcattccgggacaacgctggatcagcaacaccgaatcggaattgggactg
gggctgattctcgaagccgcctacaaccgggtcaccgtgctgtttctcgcgaccggcgaa
aaaagaatttatgcgagcgacaactcgccgctgacacgggtcaaattttcagtcggcgac
acgatcgaagcgatcgacggcgccaaaatcaccgttcatcatctggtcgaaaacaacggc
ctgatcacttacatcggtaaaaacaaggccggactggaagttcgcctggaggaaatggaa
ctgaaccaccatattcagttcaacaaaccccaggaccgcttgtttaccggccagttcgat
ccgccttcctggttttcgctgcgctacgagacctggcgccggctgcgcgaacatcaccag
tcgccggtcaagggcctgatgggcggccgcaccagcctgatcgcgcatcaaatctacatc
gcgcacgaatgcgcgaaccggctcgcgccgcgcatcatgctcgcggacgaggtcggcctc
ggcaaaacgatcgaagccgggatgattctgcatcaccggctgatcaacgggctgtcgagc
cggatattgatcatcgtgccggaaaccctgctgcatcaatggctggtcgaaatgctgcgc
cgtttcaatctgcgcttcagcatcatcgacgaggaacgctgccggaacgtcaacctggaa
aacgaactcgccgacgatgaagccggcgaagagcccggcgaaaacgaagacgtgttcgtc
aacgaacagctggtcttgtgcagccagtcgttcttcagccgctacccgaaccgccagcgc
caggcgctcgaagccggctgggacatggtgatcgtcgacgaggcgcaccatctggaatgg
agcgaagaccacccgagcccagaatacctgttcatcgaacagctcggcctgcaaaccccg
agcctgattttgttgaccgcgacgcccgaacaattgggcaagctgagccacttcgcgcgt
ctgcgtcttttggaccccgaccgtttctacagctacagccgttacctcgaagacgaacac
ctgttcgagccggtcgcgaaggcggcgcaggcgctgctcgccgagcggaccctgaccgaa
gaatccgccgctgccttgcgggccttggtcaaggatgacaatgtcgaaggcctgttgaaa
aacctgagccatccggaaaaatccgcgcatgcccgcgcgcaattgatcaacgtcttgctc
gaccatcacggcaccgggcgcatcctgttccgcaattcccggcacacggtgcagggcttt
ccggaccgcgaacgctacggctatgcgctggagggccgggaaaaccgggacgatctcgaa
caggacccgcgtttcgcctggctggtcgacacgatcagacagttcgccggcgacaaggcg
ctgctgatctgcaaggaagcgcaaaccgcgatcgatctggaagagacgctcagaaaccgc
accggcatcgccgcggcggtgtttcatgaaggcatgacgatcatcgaacgcgaccgcgcg
gccgcctatttcgccgatcaggaaagctcggcgcgcctgctgatctgctccgaaatcggc
agcgaaggccgcaacttccagttcgtacatcagctgatcctctgggacctgccagccaac
ccggatttgctgcaacaacggatcggccgtctcgaccgtatcggccaaaaacacatcatc
cgcatccatgtgccgtatttgcgcggcagcgaacaggaactgctgttccgctggtacgat
gaaggcctgaacgtattccgccacaacaacaccgcagcccagcacgtcgccgacgaactc
gcgggcgagttgagctcgctgctggcggcgagggacttcgcgccgctcgacgccttcatc
gcgcatacccgcgagcgcagcgccgcaatcgaagccgaacttcatcagggccgcgaccaa
ctgctcgaattgaactcctgccgcaaggaagtcgccgaccaatacatcgacgccttgcag
cgccacgaacggcaaagccatctgtggcaatacatggaagacgtgttcgaaagctacggc
gtcgataccgaattccattcgctcgactgtttcatcatcaaaccgagcgagcatttacgc
atctcgcattttccgaacctgcccgaagacggcatgacgatcacgatcgaccgttcgatc
gcgctcgcccgcgaggacttccagttcctgacgatggagcatccgatggtgctgggcgcg
atggacctggtgatttcgagcgagaccggcaatgcctcgatcaacgtgatcaagcatccg
agcctgaaggcagggcaattcctgctcgaatgcctgttcgtggtcgaatgcagcgcgccg
cccgaattgcaactcggacgcttcctgccgcacaccccgatccgtgtgctgatcgatcaa
aacaagcaggacctgaccgatacgatcgaccatgacgacctgatcgatgccggcgtcaat
ttcgacaagagcaagatcgtcacgtttatcaacaaccagcgcaatcacctgaatcagatg
ctcggcgcagccgaacatcgcgccaagaccgacatgcagacgctcgttcaggacgcgacc
cgcgcgatgctcgaatcgctggccgaggaaatcaaacgcatgatgcggctgcaaaaagtc
aatccgtcgatcaagcccgaagaaatcgagcacttgaaggaaatgacgatgctcgcgcat
gacaacatcgaatcggccgagctgaaactggatgccgtgcggtttatcatcaccaattga
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