KEGG   Methylomicrobium lacus: ACEPPP_15285
Entry
ACEPPP_15285      CDS       T10917                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
mlau  Methylomicrobium lacus
Brite
KEGG Orthology (KO) [BR:mlau00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mlau02044]
    ACEPPP_15285 (tssC)
Secretion system [BR:mlau02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ACEPPP_15285 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 PAV1-137_bromodom-like
Other DBs
NCBI-ProteinID: XGK38860
LinkDB
Position
3412441..3413931
AA seq 496 aa
MAELESQSQQGAAGTLELDEFSALLSKEFKPGTEAANQVNTAVSTLAQYALQDVTKISDD
VFASIQSIIAGLDQKISEQLNLIMHHPDFQKLESAWRGLHYLVNNTETDEMLKIRVFNIN
KNELGKTLKKFKGTAWDQSPLFKKLYEEEYGTFGGEPFGCLVGDYHFDHSPQDVELLGEM
AKVSAASHTPFISGAAPTVMQMQSWSELANPRDLTKIFSTPEYAAWRSLRESDDARYLGL
AMPRFLSRLPYGAKTDPVEEFDFEEDTAGADSSKYTWSNAAYAMAVNINRSFKLYGWCSR
IRGIESGGAVEGLPVHAFPTDDGGVDMKCPTEIAITDRREAELAKSGFMPLIHKKNTDFA
AFIGAQSLQKPAEYEDPDATANANLAARLPYLFATCRFAHYLKCIVRDKVGSFKEKDDMQ
RWLNNWIMQYVDGNPATSSETTKAMKPLADAEVRVEEVEGNPGYYRSQFFLRPHYQLEGL
TVSLRLVSKLPSAKGV
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggcggaattagaaagtcaaagtcaacaaggcgcggcgggtactttggagctcgacgag
ttttcggctctgctgtccaaggaattcaagcccggcaccgaggcggccaaccaagtcaat
acggcggtcagcacgctggcgcaatatgcgctgcaggacgtgaccaaaatctccgatgat
gtcttcgccagtattcagtcgatcattgccggtttggatcaaaagatctcggaacaactg
aatctgatcatgcatcatcccgatttccaaaagctggaaagcgcgtggcgcggcttgcat
tatctggtcaataacaccgaaaccgacgaaatgttgaagattcgcgttttcaacatcaac
aagaatgagttgggcaaaacgctgaaaaaattcaagggcactgcctgggatcaaagtccg
ttattcaaaaaactttacgaagaagaatatggcacattcggcggcgagcccttcggttgt
ctggtcggcgattatcatttcgaccacagtccgcaggacgtcgagttgctcggtgaaatg
gcgaaggtcagtgcggcttcgcatacgccgttcattagcggcgcggcgccgaccgtcatg
caaatgcagagctggtcggaactggcgaacccgcgcgacttaacgaaaatcttcagcaca
ccggaatacgcggcgtggcgttccttgcgcgaatccgatgatgcccgttatctcggtttg
gcgatgccgcgttttctgagccgtttgccgtatggcgcgaaaaccgatccggtcgaggag
ttcgatttcgaagaggatacggccggcgcggacagcagcaaatatacctggtccaatgcg
gcttatgcgatggcggtcaacatcaatcgctcgttcaagctgtacggctggtgctcgcgg
attcgcggcatcgagtcgggcggcgcggtcgaaggcctgccggtgcatgcgttcccgacc
gatgacggcggcgtcgacatgaaatgtccgaccgaaatcgcgattaccgatcggcgcgag
gccgaactcgccaagagcggattcatgccgctgatccacaagaaaaacaccgattttgcg
gcgttcatcggcgcgcaatcgctgcaaaagccggccgaatacgaagatccggacgcgacc
gcgaacgcaaatctggcggcgcgtttgccgtatctgtttgcgacctgccgctttgcgcat
tacctcaaatgcatagtccgcgacaaggtaggatcgttcaaggaaaaagacgacatgcag
cgctggctgaataattggataatgcaatacgtcgacggcaacccggcgacttccagcgag
accactaaggctatgaaaccgctggcggacgcagaagttcgcgtagaggaagtagaaggc
aatcccggctattaccgttcgcagttctttttaaggcctcactaccagctcgagggtttg
accgtttcgttgcgcctggtctcaaagttgccttcggccaagggcgtatag

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