Methylomicrobium lacus: ACEPPP_15565
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Entry
ACEPPP_15565 CDS
T10917
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mlau Methylomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
mlau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlau03016
]
ACEPPP_15565 (truA)
Enzymes [BR:
mlau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ACEPPP_15565 (truA)
Transfer RNA biogenesis [BR:
mlau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACEPPP_15565 (truA)
Prokaryotic type
ACEPPP_15565 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
XGK38915
LinkDB
All DBs
Position
complement(3469564..3470382)
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AA seq
272 aa
AA seq
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MKTNYRRIALGVEYDGSAFCGWQAQAEKRSIQSTLELALAKVANEPVTVICAGRTDAGVH
AFEQVVHFDTTADREPYSWVMGGNTHLPDDVRILWAKPAIGDFHARYSAIARFYRYIILN
RPVKSALTPTQTTWCYNSLDADKMHRAAQSLIGHHDFSSFRAQGCQSKSPFRQVHFVEVT
REGDRVIMDIAANAFLHHMVRNIAGTLIAIGAGKQPVDWTRELLSVKKRALAGITAPPHG
LYLGGVFYPAGYQLANHPIFAKLPADAQRHQD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaattaccgccgcatcgccctcggcgtcgaatacgacggcagcgctttttgc
ggctggcaggctcaagccgaaaagcgcagcattcaatccacgctggagctggcgctggcg
aaagtcgcaaacgaaccggtcaccgtgatttgcgcgggccggaccgacgccggcgtgcat
gccttcgaacaggtcgtgcatttcgacacgaccgccgaccgggaaccgtattcctgggtc
atgggcggcaatacccatctacccgacgacgtgcgcatcctctgggccaagccggcgatc
ggcgactttcacgcgcgctacagcgcgatcgcccgcttctaccgctacatcatcctgaac
cggccggtcaagtcggcgctgacaccgacgcaaacgacctggtgctataactctttagac
gcagacaagatgcatcgggcagcgcaatccctgatcggccaccacgatttttcctcgttc
cgcgcccaaggctgccaatccaagagccctttccggcaagtgcatttcgtcgaggtgacc
cgcgagggcgaccgcgtgatcatggacatcgccgcgaatgcgtttttgcatcacatggtc
cgcaatatcgccggcaccctgatcgcgatcggggccggcaagcagccggtcgactggacg
cgggaactgctgtcggtcaagaagcgcgccctggccggcatcacggcgccaccgcacggc
ctgtatctgggcggcgttttctatcccgcaggctatcaactcgccaatcacccgatcttc
gccaaactgcctgcggatgcgcaaaggcatcaggattga
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