Methylomicrobium lacus: ACEPPP_18390
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Entry
ACEPPP_18390 CDS
T10917
Name
(GenBank) DEAD/DEAH box helicase
Organism
mlau Methylomicrobium lacus
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
DEAD_2
Acyl-CoA_dh_C
Motif
Other DBs
NCBI-ProteinID:
XGK39460
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Position
4089528..4093760
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AA seq
1410 aa
AA seq
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MTPEALAPLLKAAEQLPPEQEAALNVLAVYYGYASPTLIGKCLYDLGFKDKKGKEPKGDT
VTPYLEALQALQLVEKHHKQSIYRCARRIVEPLTRKLAEDKRAFEKVATSIGRHAPTRGG
YYRYQNADECLRDARILFHLRDYAQANECLKIGRYVLRLPEDFDIYLAWVLNPLDTVWLK
NRHPVILQQISGYIGLHQLLHLHNDPAVGDFLRQCALEPGFVQSPLAIRSFAELQLLRGD
WEELAGWIAGRNEPDLQAVAAALTFLRGDTAQALVQFEQALAALRKQAGKRTVYFMGMAG
VIYPLAVLKQKDGQRLAKLPALLAQAVKANGLWSEIYRYLALFLQLEQGELQRRDEILAI
SLPYKISSGFTEDGQPETMMVLPNLLQHIFLLLIKFWVKADHVAKVTDDQKRLYRHLHDN
GYRWPAAELAKVFAKINPYEAKLWDAGFLAGRPLALAELFVSRPDWDLALDALLNITPHD
AKSAEPSAAADKPIRLIWLVSYHEASHSLRIEPREQKQQAKGGWSKGRGVALKRLHTEPD
SFDYLSEHDLKLCRTIDEYRDTSWYGSTYFEFNSKMPLALAGHPLLFWADSPEVRVEVVR
GEAELRVSRQDNSDKIRIELNPVPGFEQSVHVSKETPTRLRVIEFTAAHQKIYSVLGAKG
LEVPLSAQERVLQTLTGISGLLTVHSDIGGSSSSAEQIAADATPRLHLLPLGEGLKAALL
IRPFATDGAYYPPGQGGESVLAEIDGRRLQARRDLKLERQSAAELFDACPALAEAEQDEA
GEWRLEDPEHCLELLLQLQALPEGQAIVEWPEGVRFRLLGQAGSSAFSMHIKRDNDWFAL
QGELKIDDATVIEMQELLSLLGNSKGRFLQLKDGQFVALTDAFRRRLEELKAYADISGKK
VRINPLAALTLEDWGEDGGTFKADKHWQEQVRRLKSAREFQPVLPSTFQAELRDYQMDGY
AWLARLAHWGVGACLADDMGLGKTIQGLALLVERAPNGPSLIVAPTSVCMNWEKEANRFA
PTLNPQQLGGGDRQGQLDSLGPYDLLICSYGLLQQEQVAEMLANIRFRTVILDEAQAIKN
TATRRSQGAMNLQGDFRIIMTGTPLENHLGELWNLFRFINPGLLGSQEQFNQRFAGPIER
DRNHQARQQLKKLIQPFILRRTKTQVLQELPPRTEIPVYVELSPDEMAFYEAIRRESLNV
LASTDGPPGQKHLQILAAITKLRRSCCNSRLANAEISLPSSKLAAFGEIVEELLDNKHKA
LVFSQFVDHLQIIKDYVEQRGIAYQYLDGSTPAKERQQRVDAFQRGDGELFLISLKAGGV
GLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTIYRMIAKQTIEEKIVALHSHK
RDLADSLLDGADVSGRMSADDLLSLMRSDV
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagaagcactcgcccccctgttgaaagccgccgaacagctgcctcccgaacaa
gaagccgcgctgaacgtgctggccgtgtattacggctatgcctcgcccacgttgatcggc
aaatgcctgtacgatctcggttttaaggacaagaaaggcaaggagccgaaaggggatacg
gtcacgccctatctcgaagcgctgcaagccttacaactggtcgagaaacatcacaaacag
tcgatttaccgctgtgcgaggcggattgtcgaacctttgacccggaagctggctgaagac
aagcgcgcgttcgagaaagtcgcgaccagcatcggcaggcatgcaccgactcgcggcggc
tattaccgttaccaaaacgccgacgaatgtttgcgggatgcgcgcattctatttcatctc
cgcgactatgcgcaggcgaatgaatgcctcaaaatcggccgttatgttttacgtttgcct
gaagatttcgatatttatctggcgtgggttttgaatccgctggatacggtctggttgaag
aaccggcatccggtcattttgcagcagatttccggctacattggcctgcaccagttgctg
catctgcataacgatccggcggtgggcgattttttacggcaatgcgcgctggagccgggc
tttgtgcagtcgcctttggcgattcgctcctttgcggaattgcaattgctgcgcggcgat
tgggaggaactggcgggctggattgccggccgcaacgagcccgatttgcaggccgttgcc
gccgcgctgacctttctgcgcggcgataccgcgcaagcgctagtccaattcgagcaggcg
ctggcggcgttgagaaaacaggccggcaaacgcacggtctattttatgggcatggccgga
gtgatttacccgctcgctgttttgaagcaaaaggacggccagcgcttggccaaattgccc
gcgctgctcgcgcaagcagtcaaggccaacggtctttggagcgagatttaccgttatctc
gcgctgttcctgcaattagagcagggcgaattgcagcggcgcgacgaaatactggctatc
tcgctcccttataaaatcagttccggttttaccgaagacggccagcccgaaacgatgatg
gtgctgccgaatttattgcagcatatctttttattgctgatcaaattctgggtcaaagcc
gatcatgtcgccaaagtgactgacgatcagaaacgcctgtaccggcatttgcacgacaac
ggctaccgctggccggcggcggaattggccaaggtattcgccaagatcaatccttacgag
gctaaactttgggatgcgggctttctggcggggcgccctttggccttggccgaattgttt
gtcagccgccccgattgggatttggcgctggacgccttgctcaatatcacgccgcacgac
gccaaaagcgccgaaccctcggccgccgcggacaagccgattcgcctgatctggctggtc
tcctatcacgaagccagccattcgctccggatcgagccgcgcgaacagaaacagcaggcc
aagggcggctggagcaaggggcggggcgtggccttgaagcggctgcatacggaacccgac
agtttcgattatctgagcgagcacgacctgaagttgtgcaggacgatcgatgaatatcgc
gacaccagttggtacgggtcgacctatttcgaattcaacagcaaaatgccgctggcactg
gcaggacacccgttgttgttttgggcggactcgcccgaagtccgggtcgaagtggtcagg
ggcgaggccgaattgcgggtcagccggcaggacaacagcgacaaaatccggatcgaactc
aacccggtgccaggattcgagcaatctgtccatgtcagcaaggaaacgccgacccgcctg
cgcgtcatcgaattcaccgccgcccatcaaaagatttattcggtgctgggggccaagggc
ctggaagtgccgttatcggcgcaggagcgtgtgctgcaaaccctgaccggcatctcggga
ctgttgaccgtgcattcggacatcggcggcagttccagcagcgccgaacagatcgccgcc
gacgccacgccgcggctgcatctgttgccgcttggcgaagggctgaaggccgcgctgctg
atccgtccgtttgcgaccgacggcgcctattatccgccggggcagggcggcgaaagcgtg
ctggccgaaatcgacggcagacgtttacaggcgcggcgcgacctgaagcttgaaaggcag
agcgccgccgaactcttcgatgcctgcccggcgctggcagaggcggaacaggacgaagcc
ggcgaatggcggctcgaagatcctgagcactgcctcgaactgctcttgcaattacaggcg
ctgccggaggggcaggcgatcgtcgaatggcccgaaggcgtcaggttccgcctgctcggc
caggccggaagttcggccttcagcatgcacatcaagcgcgacaacgactggtttgcgctg
caaggcgagttgaagatcgatgacgcgacggtgatcgaaatgcaggaactcttgtcgttg
ctcggcaacagcaagggccgcttcctgcaattgaaggacggccagttcgtcgccctgacc
gatgcgttccgccgccgcctggaagagctgaaagcctatgccgacatcagcggcaagaag
gtccgaatcaatccgctcgccgccctgaccctggaagactggggcgaggacggcggcacc
ttcaaggccgacaagcattggcaggaacaggtgcggcggctgaagtccgcgcgcgagttt
cagccggtcctgccttcgacctttcaggcggagctgcgcgattatcagatggacggttac
gcctggctggcccggctggcgcactggggtgtcggggcctgtctggccgacgacatgggg
ctcggcaaaacgatacagggcctcgccctcttggtcgagcgcgcgccgaacggcccgtcg
ctgatcgtcgcgccgacctcggtatgcatgaactgggaaaaagaagcgaaccgcttcgcg
ccgaccctgaatccgcagcaattgggcggcggcgaccgccaggggcagctggacagcctc
gggccttacgatctgttgatttgcagctacggcctgttgcagcaggagcaggtggccgag
atgctcgcgaacatccgttttcgaacggtgattctcgacgaggcgcaggcgatcaaaaac
accgcaacccgccgctcgcaaggcgcgatgaatctgcaaggcgatttccgtatcatcatg
accggaacgcccttggaaaatcatctcggcgaactctggaacctgttccgcttcatcaat
ccgggattgctcggctcgcaggagcaattcaaccagcgtttcgcggggccgatcgaacgc
gaccgcaaccatcaggcgcgccagcaattgaagaagctgatccagcccttcatcctgcgc
cgcaccaagacccaggtcttgcaggaattgccgccgcgcaccgaaattccggtctatgtc
gaacttagcccagatgaaatggcgttttacgaagcgatccgccgcgaaagtctaaatgta
ttggccagcacggacggtcctcccggtcaaaagcatctgcaaatcctggccgcgatcacc
aagctgcgccgcagttgctgcaacagccgcctggccaacgccgagatcagcctgccgagc
agcaagctggccgccttcggcgagatcgtcgaggaactgctcgacaacaagcacaaggcg
ctggtgttcagccagttcgtcgatcatttgcagatcatcaaggactatgtcgaacagcgc
ggcatcgcctaccaatacctggacggctcgacgccggcgaaggagcgccagcagcgcgtc
gatgcgttccagcgcggcgacggcgaactgttcctgatcagcctgaaagccggtggcgtc
ggcctgaacctgaccgcggccgattatgtgatccacatggacccgtggtggaatccggcg
gtcgaagaccaggcctccgaccgcgcgcaccggatgggccagcagcgcccggtcacgatc
taccggatgatcgcgaaacagaccatcgaggaaaaaatcgtcgcgctgcacagccacaag
cgcgaccttgccgacagcctcctcgacggcgcggatgtcagcggcaggatgtcggcggat
gatttgctgagcctgatgcgcagtgacgtttga
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