Methylomicrobium lacus: ACEPPP_18510 Help Entry ACEPPP_18510      CDS       T10917                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism mlau  Methylomicrobium lacus Brite KEGG Orthology (KO) [BR:mlau00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mlau03400]     ACEPPP_18510 Enzymes [BR:mlau01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      ACEPPP_18510     5.6.2.6  RNA 3'-5' helicase      ACEPPP_18510 DNA repair and recombination proteins [BR:mlau03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     ACEPPP_18510 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_4th_Lhr DEAD WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII AlkZ-like Cas3-like_C_2 WHD_2nd_Lhr PhoH AAA_25 EB_dh Motif Other DBs NCBI-ProteinID:  XGK39483 LinkDB All DBs Position complement(4118765..4123012) Genome browser AA seq 1415 aa AA seqDB search MTSTLHSFHSVVARWFLDQFQAPTDVQSQAWPAIQAGQATLIAAPTGSGKTLAAFLAVID RLVKQGVEGFLPDQTLVLYVSPLKALSNDIHKNLELPLSGIGMALLEAALPGVVIRAQTR TGDTSQAERIAMKRTPPHILVTTPESLYILLTSESGREMLKTVHSVIVDEIHALAGNKRG AHLMLSLERLTQLTEKPPVRIGLSATQKPLTTIARFLTGDREEPCTIIDTGHVRQRDLKI EVTGSPLEAVMAAEVWSEIYDRLVELINDHHTTLIFVNTRRLAERASAALAEHLGEEFVT AHHGSLAKEHRLDAENRLKQGSLKALVATASLELGIDIGDVDLVCQLGSPHGIAAFLQRV GRSGHRLGAIPKGRLFPLSRDDLVECTALLNAIAHDQLDTITIPDHPLDVLAQQIVAEVA CREWPERDLYDALRKAWPYRTLTPEQYTAVVKMLADGYHTRRGRRGAYLHRDVVHGMLRP RKGARLTAIVNGGAIPDQFDYDVIMQPEGLFVGTLNEDFAFESIPGDIFQLGNNSYRMLK IEQGKVFVEDAHGQPPNIPFWFGEAPGRSRELSEAVSDLSETIDLLLEQGGDAAHDFIFN RLGLPSAAAEQLHTYLATAKAALTVLPSFKTIVFERFFDETGDMHFVVHSRYGSRINKAW GLALRKRFCRRFNFELQAAATEDNIVLSLGPTHSFPLIEPAGYLKAASVKDVLIQALLAA PMFPTRWRWVANTALAVPRSRGGKKVPAPFQRNDAEDLIAVIFPDQLACFENIAGEREIP EHPLVDQTLWDCLHDLMDIDGLEAVLQGIESGAVQVIARDLTSPSPLALEIINARPYAFL DDAPAEERRTLAIQQRRFGSPEDAAEIGRLNPEAIAAVKSEAWPEARDPDELHDALNILG FMTEEEGLQNGWATLFAALQQSQRATVMNLPQEQRLWVAAERLSELQALFPEADLAPVIP AIPPDRELTEEDILRDLVRSRLEGLGPVTAEQLAEPLALPIAHIDQALAALEQQGVVLQG RFTPDALTTEWCERGLLARIHRYTLKQLRKEIEPVAPSVYMRFLFHWHGLNEPGSGEASL AKTLHQLEGCNLPAFGWEHDILTRRIKPYFASELDQLCTSGKFIWLRLKALGDSSPKSAG KNTPVALVAREHLDSWRAFAALPDIASLELSGNALKVHAEIKEWGASFFQELVSETGLLK TQLEEALGELAAAGLVTSDSFQGLRTLVTPQKILHRRGKRYPIYDPFAAAGRWSLLRPSR VQTTENFPAVEHIARVLLKRYGVVFRKVLEREENLPSWRELLYVYRRLEARGELRGGRFV QGFAGEQFALPEAVGLLRDMRKPPIISELTVINAADPLNLTGIITPGDRIPSLHSQRIVY RDGVPVAYGTGKNVQYLQSLDAEHQWQLQWALLNK NT seq 4248 nt NT seq  +upstreamnt  +downstreamnt atgacaagcaccctgcattccttccattctgtcgttgcgcgttggtttttggaccaattt caggcaccgacggacgttcaatctcaggcatggccggcgatccaggcaggccaggcgacg ctgatcgccgcgccgaccggttccggcaagacgctggcggcctttctcgcggtgatcgat cgactggtcaagcaaggcgtcgagggctttctgcccgatcaaacgctggtgctctatgtc tcgccgctgaaagcgctgtcgaacgacatccacaagaatctcgaactgccgttgtccggc atcggcatggcactgctcgaagccgccctgcccggcgtcgtgatccgcgcgcaaacacgg accggcgataccagccaggccgagcgcatcgcgatgaaacgcaccccgccgcatatcctg gtcaccaccccggaatcgctatacatcctgctgacctccgaatcgggccgcgagatgctg aaaacggtgcacagcgtgatcgtcgacgagatccatgccttggccggcaacaagcgcggc gcgcacctgatgttgtcgctggaaaggctgacgcagttgaccgagaagccgccggtacgg atcggcctgtccgcgacgcaaaagcccttgaccacgatcgcgcgttttctgaccggagac cgtgaagagccctgcacgatcatcgataccggccatgtccggcaacgcgatctaaaaatc gaagtgaccggttcgccgctggaggcggtgatggcggccgaggtctggagcgaaatctac gaccgcctcgtcgaactgatcaacgaccatcacaccacgctgattttcgtgaatacccgg cgcctggccgaacgcgcttccgccgccctggccgagcatctcggcgaagaattcgtcacc gcgcaccacggcagcctggccaaggaacaccggctcgatgcggaaaaccggctcaagcag ggcagcctgaaggcgctggtcgcgaccgcctcgctcgaactcggcatcgacatcggcgat gtggacctggtctgccagctcggctcgccgcacggcatcgcagccttcctgcagcgggtc ggccgttccgggcacaggctcggcgcgattccgaaaggccgcctgtttccgctctcgcgt gacgatttggtcgaatgcacggcattgttgaacgcgatcgcgcacgatcagctcgacacg attactatccccgatcaccctttggatgtgctcgcccagcagatcgtcgccgaagtcgcc tgccgcgaatggccggaacgcgatttgtacgacgccctgcgcaaagcctggccgtaccgg acgctgacgcctgagcaatacaccgcggtcgtcaagatgctcgcggacggctaccacacc cggcgcggccggcgcggcgcctatctgcaccgcgatgtggtgcacggcatgctcaggccg cgcaagggcgcgcggctgaccgcgatcgtgaacggcggcgcgattccggaccagttcgat tatgacgtgatcatgcagccggaaggactgttcgtcggcaccctgaacgaggatttcgcg ttcgaaagcatccccggcgacatcttccagctcggcaacaactcctaccggatgctgaaa atcgagcaaggcaaggtctttgtcgaggacgcgcacggccagccgccgaacattccgttc tggttcggcgaggcaccggggcgcagccgcgagctgtccgaggcggtatcggatttgtcc gaaacgatcgaccttttgctcgaacaaggcggcgatgccgcgcatgacttcatcttcaac cggctcggcctgccctcggccgccgccgagcaactgcatacgtatcttgcgaccgcgaaa gccgcgctgaccgtgctgccgtcgttcaaaacgatcgtcttcgagcgtttctttgacgag accggcgacatgcacttcgtggtgcattcgcgctacggctcgcggatcaacaaggcctgg ggactggcgctccgaaaacgcttctgccggcgcttcaatttcgaactgcaggcggccgcg accgaagacaacatcgtgctgtcgctcgggccgacgcacagttttcccttgatcgagccg gccggttatctgaaggccgcctcggtcaaggatgtcttgattcaggcgctcttggccgcg ccgatgttcccgacgcgctggcgctgggtcgccaataccgcactcgccgtgccgcgaagc cgcggcggcaagaaagtgccggcgccgttccagcgcaacgatgcggaagatttgatcgcg gtgatctttcctgaccagctcgcctgtttcgagaatatcgccggcgagcgcgagattccg gagcacccgttggtcgatcaaactttgtgggactgcctgcacgacctgatggacatcgac ggcctggaggccgtgctgcaaggcatcgaaagcggcgcggttcaggtgatcgcccgcgac ctgacctcgccatcgccgctggcactggaaatcatcaatgcccgcccctatgcctttctc gacgacgcgccggccgaggagcgccgcaccctggcgatccaacagcgccgtttcgggagc cccgaggatgcggcagaaatcggccggctgaatccggaggcgatagccgccgtgaagagc gaggcgtggccggaagcgcgcgatccggacgaactgcacgatgccttgaacatcctcggc ttcatgaccgaagaggaaggcttgcaaaacggttgggcgacactgttcgcggccttgcag caaagccaacgcgcaacagtgatgaatctgccgcaggaacaaaggctttgggtcgccgcc gaacgcctgtcagaattgcaggcgctgtttccggaggccgatctggcgccggtcatcccg gcgataccgcctgaccgggagctaaccgaagaagacatcttgcgcgatctggtccgcagc cgcctggaaggactcggccccgtcaccgccgaacaactggccgagccgctcgccttgccg atagcgcatatcgatcaggcgctggccgccctggagcaacagggcgtcgtgctgcaaggc cgctttacgccggatgccttgacgaccgaatggtgcgaacgcggcctgctcgcgcgcatc caccgctatacattgaagcaattgcgcaaggaaatcgaaccggtcgctccgagcgtttac atgcgcttcctgtttcactggcacggcctcaatgaaccgggaagcggcgaagcctcgctc gcgaaaaccctgcaccagctggaaggctgcaacctgcccgccttcggctgggaacatgac atcctgacccggcgcatcaaaccgtatttcgcttcggaactcgatcaactctgcacttcg ggcaaattcatctggctgcgcctgaaagccctcggcgacagcagcccgaaatccgccggc aaaaacaccccggtcgccctggtcgcgcgcgagcatctggattcctggcgcgccttcgcg gcgctgccggacatcgcctcgctcgaactttccggcaatgcgctgaaagtgcatgccgag atcaaggaatggggcgcgagtttctttcaggaattggtcagcgaaaccgggctgctgaag acgcagctggaggaagcgctcggcgaactggccgccgccggcctcgtcacctcggacagt ttccagggcctgcgcacgctggtcaccccgcaaaagatcctgcaccggcgcggcaagcgc tatccgatttacgatcccttcgccgcggccgggcgctggtcgctgctgcgaccgtcgcga gtgcaaacaaccgagaattttccggccgtcgagcatatcgcccgcgtgctgctcaaacgc tacggcgtggtgtttcggaaggtactggaacgggaagaaaacctgccaagctggcgcgaa ctgctctatgtttaccgccgcctggaagcgcgcggcgagctgcgcggcggccgcttcgtg caaggtttcgcgggcgagcagtttgccttgcccgaggcggtcggcctgctcagggacatg cggaagccgccgataatctccgaactgaccgtgatcaacgcggcagatcctttaaatctg accggcatcatcacgcccggcgaccggattccgtcgctgcacagtcagcgcatcgtttac cgggacggcgtgccggtggcctacggtacgggcaaaaacgtgcaatatctgcaaagctta gacgcggagcatcaatggcaattgcagtgggcactgttgaacaagtaa

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