Microvirga lotononidis: U0023_00520
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Entry
U0023_00520 CDS
T09656
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mld
Microvirga lotononidis
Pathway
mld03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U0023_00520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mld03021
]
U0023_00520
03400 DNA repair and recombination proteins [BR:
mld03400
]
U0023_00520
Enzymes [BR:
mld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U0023_00520
Transcription machinery [BR:
mld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U0023_00520
DNA repair and recombination proteins [BR:
mld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U0023_00520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
WQO27631
LinkDB
All DBs
Position
complement(115224..116246)
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AA seq
340 aa
AA seq
DB search
MVVIQKNWQELIKPNKLEVAPGDDPKRIATVVAEPLERGFGTTLGNSLRRVLLSSLQGAA
VTAIHIDGVLHEFSSIPGVREDVTDIVLNVKTIAIKMQGEGAKRMTLRKTGPGAVTAGDI
NTVGDVQILNPELVLCTLDEGAEIRMEFTVDTGKGYVPAERNRTEDAPIGLIPVDSLYSP
VKKVSYRIENTREGQILDYDKLIMTVETNGAVTPEDAVAYAARILQDQLQVFVNFEEPRK
EEAAAAAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGR
KSLNEIKEVLAGMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggttgtgatccaaaagaactggcaagagctgattaagccgaacaagctcgaagtggcc
cccggcgacgatccgaagcgcatcgcgacggtcgtggcggagccgctcgagcgtggcttc
ggcacgacgctcggcaactcgctgcgccgggtcctcctgtcgtcgctccagggcgcggcg
gtgacggcgatccatatcgacggcgtgctgcacgagttctcgtccatcccgggcgtccgc
gaggacgtgaccgacatcgtcctcaacgtgaagacgatcgccatcaagatgcagggcgaa
ggcgccaagcgcatgaccctccgtaagacgggccccggcgccgtcacggccggcgacatc
aacacggtcggcgacgtgcagatcctgaaccccgaactcgtgctctgcaccctcgacgag
ggcgccgagatccgcatggagttcacggtcgacacgggcaagggctatgttccggccgag
cgcaaccgcaccgaggacgctcccatcggcctcatcccggtcgactcgctctacagcccg
gtcaagaaggtttcctatcgtatcgagaacacccgcgagggccagattctcgactacgac
aagctgatcatgacggtcgagaccaacggcgccgtgacgcctgaggatgccgtggcctat
gccgctcgcatcctgcaggaccagctccaggtcttcgtcaacttcgaagagccgcgcaag
gaagaggctgccgctgccgcaccgcagctgccgttcaacccggcgctcctcaagaaggtg
gacgagctggagctgtcggtccgttcggccaactgcctgaagaacgacaacatcgtctat
atcggcgacctcatccagaagtccgaggcggaaatgctccgcaccccgaacttcggccgc
aagtcgctcaacgagatcaaggaagttctggccggcatgggccttcacctcggcatggac
gtgccgggctggccgccggagaacatcgaagacctcgcgaagcgcttcgaagagcattac
tga
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