Microvirga lotononidis: U0023_01360
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Entry
U0023_01360 CDS
T09656
Name
(GenBank) HAMP domain-containing protein
Organism
mld
Microvirga lotononidis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
PDE8A_N
PGDH_inter
RNase_Y_N
CASP_C
Motif
Other DBs
NCBI-ProteinID:
WQO27787
LinkDB
All DBs
Position
complement(287994..293846)
Genome browser
AA seq
1950 aa
AA seq
DB search
MSQVETTTSQLDPRLLLKTLRAFRKGDFSARLPSDLTGIDGEIAEAFNDIADLNQGLAQE
LERVAKVVGKEGRIEERGQLAAATGCWSECVDSVNAMIGDIVQPTVEVARVIGAVAKGDL
SQTIDLATDGRPLRGEFLRIGKVVNTMVGQLGSFASEVTRVAREVGSEGKLGGQAKVKGV
AGTWKDLTENVNLMAANLTGQVRNIAEVTTAVANGDLSKKITVDVKGEILELKDTINTMV
DQLNSFASEVTRVAKEVGSEGKLGGQAQVRGVGGVWKDLTDNVNMMAANLTGQVRNIAEV
TTAVARGDLSKKITVDVKGEILALKSTINTMVDQLNSFASEVTRVAKEVGSEGKLGGQAQ
VEGVGGVWRDLTENVNMMGANLTAQVRNIAEVTTAVANGDLSKKITVEVKGEILELKNTI
NTMVDQLNSFASEVTRVAKEVGSEGKLGGQAQVRGVAGTWKDLTDNVNLMAANLTGQVRN
IAEVTTAVANGDLSKKITVEVRGEILELKSTINTMVDQLNSFAGEVTRVAKEVGSEGKLG
GQARVEGVAGTWKDLTDNVNLMAANLTGQVRNIAEVTTAVANGDLSKKITVDVRGEILEL
KSTINTMVDQLNSFAGEVTRVAREVGTEGKLGGQAQVRGVAGVWKDLTDNVNMMAANLTG
QVRNIAEVTTAVANGDLSKKITVAVEGEILELKSTINTMVDQLNSFAGEVTRVAREVGTE
GKLGGQAQVRGVGGVWKDLTDNVNMMAANLTGQVRNIAEVTTAVANGDLSKKITVDVRGE
ILELKSTINTMVDQLNSFASEVTRVAREVGIEGKLGGQAQVRGVAGTWKDLTDNVNMMAN
NLTGQVRGIASVVTAVAEGDLKRKLIVDAKGEIAALAETINEMIDTLATFADQVTNVARE
VGVEGKLGGQARVPGAAGLWRDLTDNVNQLAANLTTQVRAIADVATAVTKGDLTRSISVE
ASGELASLKDNVNEMIRNLRDTTLKNAEQDWLKTNLAKFTRMLQGERDLTTVSNMILSEI
APLVNAQQGVFYTMESDGNEPILDMVASYAFTERKHLNNRFRLREGLVGQVAYEKKRILL
TNVPGDYITISSALGEAPPLNIIVLPVLFEQEVKAVIELASFSRFSETHQSFLEQLTESI
GIVLNTIAANMRTEGLLKQSQLLTTELQSQQEELRNTNDRLEQQAASLRQSEELLRQQQE
ALQKTNEELEDKARLLELQKREVETKNQEVSVAKTALEEKAEQLSLTSRYKSQFLANMSH
ELRTPLNSLLILSKLLTENSDGNLTDKQREFAKTIHAAGSDLLSLINDILDLSKIESGTV
SLEVSSVAFKDLVDNMERTFRQVAEERKLDFHVEVDQKLPSSIRTDSKRLQQVLRNLLSN
AFKFTERGGVTLQIGSAEGTPLRSGSQWVAISVTDTGIGIPEEKQRIIFEAFQQADGTTS
RKYGGTGLGLSISREIARLLGGEIVVSSTPGSGSTFTLFVPVEPPASHGTAGATMSMRPN
GDGAGQFSATSDDTAGTMIRQPSAAMALSASLDDRHAITSGDRVVLIVEDDAMFASVLLE
LAREEGFRGLIAMDGASALALAHRYKPHAITLDIGLPDMDGWALLDLLKHDPRTRHVPIH
VISVDDQKKRGLKAGAFGFLEKPVDREALMGALNRTKEFIDRPVKKLLLVEDDDIQRMSL
SELMKSEQVDVTAVGTAETALEVIQVRQFDCAVVDLGLPDLPGAELIERIRKTKGGEELP
IVIYTGQDLTKAEERHLQGMAATLIVKGEGSSERLLNDTALFLHRAISAIPEEKQIVVQH
RADDALDGRKVLIIDDDMRNIFSLTSALEQHGISVIFAENGLEGIEKLQANPDVDVALVD
IMMPEMDGYETMREIRNIPRYRDLPLVAVTAKAMKGDREKCLEAGATDYVSKPVDVDQLL
AVLRVQLSRSTYIPDGKMTPNGAVETGLNS
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagtcgaaaccaccacttcgcagcttgatcccaggttgctcctcaaaacattg
cgcgccttccggaaaggcgacttttccgcccggctgccgtcggacctgactgggatcgac
ggcgagatcgcggaagcgttcaacgacattgcggacctgaaccagggcttggcgcaggag
ttggagcgcgtcgccaaggtggtcggcaaagaggggcggatcgaggagcgcgggcaactc
gcagcggcgaccggctgctggagcgagtgcgtcgattcggtgaacgccatgatcggcgac
attgtccagccgaccgtcgaggtggcgcgtgtcatcggcgccgtggcaaaaggcgacctg
agccaaacgatcgacctcgccaccgacggacgtcccctgcgcggcgaattccttcgcatc
ggcaaggtggtcaataccatggtgggccagcttggaagcttcgcctccgaagtgacccgc
gtggcgcgcgaggtgggctcggaaggcaagctcggtggtcaggcgaaggtcaagggcgtt
gccggaacctggaaggatctgaccgagaacgtgaaccttatggcggccaatctgaccggt
caggtccgcaacatcgccgaggtcacaacggcggtcgcgaatggcgacctgtcgaagaag
atcaccgtagacgtgaagggcgagattctggagctgaaggacaccatcaacacgatggtg
gatcagctgaactcctttgcatccgaagtgacgcgcgtcgcgaaagaagtgggctcggaa
ggtaagctcggcggtcaggctcaggtgcgcggcgtcggcggtgtctggaaggacctcacg
gacaatgtcaacatgatggcggcgaacctcaccggacaggtccgtaacatcgccgaggtc
acgacggcggtcgcccgcggcgatctgtcgaagaagatcaccgtggatgtgaagggggag
attctggccctcaagtcgaccatcaacaccatggtcgaccagctgaattccttcgcgtcg
gaagtgacgcgcgttgcgaaagaggtgggctcggaaggcaaactcggcggccaggcgcag
gtggagggcgtcggcggcgtctggcgcgacctgaccgagaacgtcaatatgatgggcgcg
aacctgacagcacaggttcgtaacatcgccgaggtgaccacggccgtcgcgaatggcgac
ctgtcgaagaagatcacggtggaggtgaagggcgaaattctggaactcaagaacaccatc
aatacgatggtggatcagctgaactcctttgcctccgaagtgacgcgcgtcgcgaaagaa
gtgggctcggaaggtaagcttggcggtcaggcccaggtgcgcggtgttgccggcacctgg
aaggatctcaccgacaacgtcaacctcatggcggcgaacctcaccggtcaggtgcgtaat
atcgcggaagtcacgaccgcagtcgcgaacggcgacctctcgaagaagatcaccgtggag
gtcagaggtgagattctggagctgaaatcgaccatcaacaccatggtggaccagctcaat
tcattcgccggcgaagtgacgcgcgtcgccaaggaggtgggctcggaaggcaagctcggc
ggacaggcgcgcgtcgaaggcgtggccggaacctggaaggatctcaccgacaacgtgaac
ctgatggccgcgaacctgacgggtcaggtccgtaacatcgccgaagtgacgacggcggtc
gcgaacggcgatctgtcgaagaagatcaccgtggacgtgcgcggcgagatcctggagctg
aagtccacgatcaacaccatggttgaccagctcaactccttcgcgggcgaagtgacccgc
gtggcgcgcgaggtgggtaccgaaggcaagctcggcggccaagcccaggtgcgcggtgtc
gccggtgtctggaaggacctcaccgacaacgtcaacatgatggccgcgaacctgacgggt
caggtgcgaaacattgccgaggtgacgacggcggtcgcgaacggcgacctgtcgaagaag
atcaccgtcgcggtcgaaggcgagattttggagctgaaatcgaccatcaacaccatggtg
gatcagctcaactcctttgcgggcgaagtgacgcgcgtggcgcgcgaggtgggtaccgaa
ggcaagctcggcggtcaggctcaggtgcgcggtgtcggtggcgtctggaaggacctcacc
gacaacgtcaacatgatggccgcgaacctgacgggtcaggtgcgtaacatcgcggaagtc
acgacggcggtcgcgaacggtgacctgtcgaagaagatcaccgtggacgtgcgcggcgag
atcctggagctgaaatcgaccatcaacaccatggtcgaccagctcaactccttcgcatcg
gaagtgacgcgcgtggcgcgcgaggtgggcatcgaaggcaagctcggcggtcaggcccag
gtgcgcggcgtggccggcacctggaaagacctcaccgacaacgtgaacatgatggcgaac
aacctcaccggtcaggtgcgcggcatcgccagcgtggtgacggcggtcgcggagggcgat
ctcaagcgcaagctcatcgtggacgccaagggcgaaatcgcggcgctcgccgagaccatc
aacgagatgatcgacacgcttgcgaccttcgccgatcaggtgacaaacgtcgcccgcgaa
gtgggcgtggaaggcaagctgggcgggcaggcgagggtgccgggcgccgcaggcctgtgg
cgcgatctcaccgacaacgtgaaccagctcgccgccaacctgaccacgcaggtgcgcgcc
atcgcggatgtggccaccgcggtgaccaagggcgatctcacccggtcgatttcggtggaa
gcctcgggcgagctggcctcgctcaaggacaacgtgaacgagatgatccgcaacttgcgc
gacacgacgctcaagaacgcggagcaggattggctgaagaccaacctcgccaagttcacc
cgcatgctgcagggcgagcgcgatctcaccaccgtgtccaacatgatcctgtcggaaatc
gctccgctcgtgaatgcacagcagggcgtgttctacacgatggagagcgacggcaacgag
ccgatcctcgatatggtggcgtcctacgccttcacggagaggaagcatctcaataaccgc
ttccgcctgcgtgagggactggtcgggcaggttgcctacgagaagaagcggattctcctc
accaacgtgccgggcgactacatcaccatcagctcggctctcggcgaagcgccgcccttg
aacatcatcgtgctgcccgtcctgttcgagcaggaggtgaaggcggttatcgagcttgcc
tccttcagccgcttctcggagacgcaccagtcgttcctcgagcagctcacggaatcgatc
ggcatcgttctgaacaccatcgcggcgaacatgcggacggaagggcttctgaagcagtcc
caacttctgaccaccgagctgcaaagccagcaggaagagctgcgaaacaccaacgatcgg
ctggaacagcaggccgccagcctgcgccagtccgaggaactcctgcggcagcagcaggaa
gcgctgcagaagacgaacgaagagctcgaagacaaggcgcgcctgctcgaactccagaag
agggaggtcgagacgaagaaccaggaggtctccgtcgcaaagactgccctggaggagaag
gccgaacagctttcgctcacatcgcgctacaagtcgcagttcctggccaatatgagccac
gagctgaggacgccgttgaactcgctcctgatcctgtcgaagctcctgaccgagaactcg
gacggcaacctgaccgacaagcagcgggaattcgccaagaccatccacgcggccggctcc
gacctgctctcgctcatcaacgacattctcgacctgtcgaagatcgagtccggcaccgtc
agcctggaggtgtcgagcgtcgccttcaaggatctcgtcgacaacatggagcggaccttc
cgccaggtggcggaggaacgaaagctagatttccatgtggaggtcgatcagaagctgcca
tcgtcgatcaggacggattcgaagcggttgcagcaggttctgcgcaacctcttgtcgaac
gccttcaagttcacggagcgcggaggcgtaacgctgcagatcggctcggccgagggaacg
cccctgcggtccggcagtcagtgggtggccatttcggtgacggataccggcatcggcatc
ccggaggagaagcagcgcatcatcttcgaggctttccagcaggcagacggcacgacgagc
cggaaatacggcggaacaggcctcggcctgtcgatcagccgcgagattgcccgtctgctc
ggcggcgagatcgtcgtgtcgagcacgcctggaagcggctcgaccttcacgctgttcgtc
ccggtcgaaccgcccgccagccatggaacagccggcgcgacaatgtccatgcggccgaac
ggagacggagccggtcagttcagcgctacatccgacgataccgcgggaacgatgatccgc
cagccctcggcagccatggctctctcggcgtccctggacgaccgtcacgcgatcacgagc
ggagaccgcgttgtcctcatcgtcgaggacgacgccatgttcgcctcggtgctgctggag
ctggcccgggaggagggcttcaggggcctgatcgccatggacggcgcttcggcgcttgcc
ctggcgcatcgctacaagccgcatgcgatcacgctcgatatcggattgcccgatatggac
ggctgggcgcttctcgacctcctgaagcacgatccgcgcacgcggcatgtgccgatccat
gtgatctccgtcgacgaccagaagaagcgtggtctcaaggcgggtgcattcggcttcctg
gaaaagccggtcgatcgggaggcgctcatgggagcgctcaaccgcacgaaggagttcatc
gatcgtcccgtgaagaagctgcttctcgtcgaggatgacgacattcagcgcatgagcctg
tccgaactcatgaagagcgagcaggtcgacgtgaccgccgtgggaacggccgagacggcg
ctcgaggtcatccaggtgcggcagttcgactgcgcggtcgtcgatctgggcctgccggat
cttccgggtgcggaactcattgagcgcatccgcaagacgaagggcggggaggagctgccg
atcgtcatctataccgggcaggacctgacgaaggcagaggagcggcatctccagggcatg
gcggccacgctgatcgtgaagggggaaggttcgtccgagcgccttctcaacgacacggct
ctgttcctgcatcgggccatcagcgcgattcccgaggagaagcagatcgtcgtccagcac
cgggccgacgatgcgctcgatggccggaaggttctgatcatcgacgacgacatgcgcaac
atcttctcgttgacgagcgcgctcgagcagcatgggatctcggtcatcttcgccgagaac
ggcctcgaaggcatcgagaagcttcaggccaacccggatgtcgacgtggccctggtcgat
atcatgatgccggagatggatggttacgagaccatgcgggaaatccggaacatcccacgc
tatcgcgaccttcccctcgtggcggtgacggcgaaggccatgaagggcgatcgcgagaag
tgtctcgaagccggcgcgaccgattatgtgtcgaagcctgttgatgtggatcaacttctg
gccgtcttgcgcgttcaactcagtcggagcacatatatcccggacgggaagatgactccc
aatggtgcggtagagaccgggttgaactcatga
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