Microvirga lotononidis: U0023_01935
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Entry
U0023_01935 CDS
T09656
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mld
Microvirga lotononidis
Pathway
mld03420
Nucleotide excision repair
mld03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U0023_01935
03430 Mismatch repair
U0023_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mld03400
]
U0023_01935
Enzymes [BR:
mld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0023_01935
DNA repair and recombination proteins [BR:
mld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0023_01935
MMR (mismatch excision repair)
Other MMR factors
U0023_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
PcrA_UvrD_tudor
DUF3553
BLH_phosphatase
DEAD
Motif
Other DBs
NCBI-ProteinID:
WQO27892
LinkDB
All DBs
Position
438575..440950
Genome browser
AA seq
791 aa
AA seq
DB search
MNHSDNRPDPQDSLAHEPASGSLSARARAAVAPQSPYLNGLNPEQRAAVEATEGPVLVLA
GAGTGKTRVLTTRIAHLIATGKAYPSQILAVTFTNKAAREMRERITAVIGPVAEGMQWLG
TFHSIGTKILRRHAELVGLRSDFTILGTDDQLRLMKQVIEAEGIDEKRWPARQLAGHIDG
WKNRGLGPDQVPAGEAGAFANGKGGRLYRAYQERLKVLNAVDFGDLLLECLRLWREHPDI
LGQYQNRFRYMLVDEYQDTNVAQYLWLRLLAQARKNLCCVGDDDQSIYGWRGAEVDNILR
FEHDFPGATVIRLERNYRSTGHILSAASGLIAKNQGRLGKTLRTEDEPGEKVTITGAWDS
EDEARLIGEEIEAFHAKKHPLSEIAILVRISAQMREIEDRLVTLGVPYRVIGGPRFYERA
EIRDALAYLRVVNQPADDLAFERIVNTPKRGLGDATIQVLHNHARAARVPLMEAARFIVE
TDELKPKPRATLRDLLISFGRWSKLSETMTQSEVAQTVLEESGYTDMWQKDKSADAAGRL
ENLKELVRSMEEFPDLQSFLEHVSLVMEANESDTTERVSLMTLHAAKGLEFDTVFLPGWE
EGLFPNQRALDESGRAGLEEERRLAHVGLTRARRRAKIYFASNRRIHGLWNSTVPSRFVD
DLPETNVEIVEAPANFSYGGYGGGSRFDRMQPFSGSSYQTPGWQRAQAHRSSSDDGGYSA
RRSGDRRGPMLIEGELVAKSTGGSGFAVGGRVLHTKFGPGTIEAVDGNKLTVEFDKAGRK
MVLDSFVEALG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactccgataaccgccccgacccacaggacagcctcgcccatgaaccggcgtcc
ggctccttgagcgcccgcgcccgtgcagccgtcgcgccgcaatcgccctacctgaacggc
ctgaacccggagcagcgcgccgccgtcgaggccacggagggccccgttctggtgctggcg
ggcgccggtaccggcaagacccgcgtgctgacgacccggatcgcgcacctgatcgccacc
ggcaaggcctatccttcccaaatccttgccgtgaccttcaccaacaaggcggcgcgggag
atgcgagagcggatcaccgccgtgatcggtccggtggccgagggcatgcaatggctcggc
accttccattccatcggcaccaagatcctgcgccgtcatgcggagctcgtcggcctgcgc
tccgacttcaccatcctcggcacggacgaccagttgcgcctgatgaagcaggtgatcgaa
gccgaggggatcgacgagaagcggtggcccgcgcgccagctcgctggccacatcgacgga
tggaagaaccggggccttgggcccgatcaggtcccggccggtgaagccggcgccttcgcg
aacggcaagggcggacggctctaccgcgcctaccaggagcggctgaaggtcctcaacgcc
gtcgatttcggcgacctcctgctcgagtgcctgcgcctgtggcgagagcatccggatatc
ctggggcagtaccagaaccggttccgttacatgctggtggacgagtaccaggacaccaac
gtcgcccaatatctctggctgaggctgctcgcccaggcgcgcaagaacctgtgctgcgtc
ggcgacgatgatcagtcgatctatggatggcgcggcgcggaggtcgacaacatcctgcgc
ttcgagcacgacttccccggcgcgaccgtgatccgactggagcgcaattaccgctcgacc
ggccacatcctctccgccgcctccggcctcattgccaagaaccagggccgtctcgggaag
accctgcgcacggaggacgagccgggcgagaaggtgacgatcaccggtgcctgggattcc
gaggacgaagcccgcctgatcggcgaggagatcgaggccttccacgccaagaagcatccg
ctctccgagatcgccatcctggtgcgaatctccgcccagatgcgcgagatcgaagatcgg
ctggtaacactcggcgtcccctatcgtgtcatcggcgggccgcgcttctacgagcgcgcg
gaaatccgcgatgccttggcttatcttcgcgtcgtcaaccagccggcggacgatctcgcc
ttcgagcgcatcgtgaacacgccgaagcgcggcctgggcgatgccacgatccaggtgctg
cacaaccacgcccgcgccgcccgtgtccctctgatggaggccgcgcgcttcatcgtcgag
accgatgagctgaagccgaagccccgcgccacgctgcgcgatctcctgatctcattcgga
cgctggtcgaagctctccgagaccatgacgcagtcggaagtcgcccagaccgtgctggag
gagtccggctataccgacatgtggcagaaggacaaatcggccgatgccgcgggacggctg
gagaacctcaaggaactggtgcgctccatggaggagttccccgatctgcagagcttcctc
gagcacgtgtccctggtgatggaagccaacgagagcgacacgaccgagcgcgtgagcctc
atgacgcttcacgcggccaagggcctggagttcgacacggtcttcctgcccggctgggaa
gaaggcctgttcccgaaccagcgcgccctcgacgagagcggccgcgccggcctcgaggaa
gagcgtcgcctcgcccatgtgggcctgacacgcgcgcgacgtcgggccaagatctacttc
gcgtcgaaccggcgcattcatggcctgtggaactcgaccgtcccgagccgcttcgtcgac
gacctgcccgagaccaatgtcgagatcgtcgaggctcctgcgaacttctcctatggcggc
tacggcggcggctcccgcttcgaccgcatgcagcctttcagcggttcctcctatcagacg
cccggctggcaacgcgcgcaggcgcatcgcagctcgagcgacgacggaggctattccgct
cgccgttcgggcgacaggcgcgggccgatgctgatcgaaggcgagctggtggccaagtcc
accggaggctcgggctttgccgtgggcggacgcgtcctgcacaccaagttcggccccgga
accatcgaagccgtggacggcaacaagctcactgtcgagttcgacaaggcgggacgcaag
atggtgctcgacagttttgtcgaggctttgggctga
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integrated database retrieval system
