Microvirga lotononidis: U0023_05230
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Entry
U0023_05230 CDS
T09656
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mld01002
]
U0023_05230
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mld01011
]
U0023_05230
Peptidases and inhibitors [BR:
mld01002
]
Cysteine peptidases
Family C82
U0023_05230
Peptidoglycan biosynthesis and degradation proteins [BR:
mld01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
U0023_05230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PilX_N
Motif
Other DBs
NCBI-ProteinID:
WQO28491
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Position
1105911..1107677
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AA seq
588 aa
AA seq
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MRDVRKTALWLGLIGSVSLFPLSALADDAAQPQADLVQTAPAEPSFHDVAAQDADARKDT
AAQAVPLPEPAPVTIEAVDLKAAPAIDIPLPDAAPVTALMQTDLFRMAVEGLFADDAAMR
EMRVSAKDREALQAFYAQAERPLVWARDGAWSPAALGAMERLKAADEDGLDPTDYSLPDR
GLRRDANPAQWAQADVRLSLSVIRYARDARGARIDLARLSPLVTPKLALPAVDEVLSKVS
TAGDAGGALEAYNPPHAGYKALKEKLAKLRESHPSQPSVRLPRGPVLRVGMKDPRVPLIR
ARFNLTKEANNQTVYDERVASAVAAFQKEKGLPDTGVLNAQTVAALSGPSVAQRQSDLIA
NMERWRWLPANLGQRHIMVNVPEFRLQMVEGRDTVYQTRVIVGKEQSQTPIFSEDMKYLV
VNPSWTIPPSIMKKEILPALANDPDYAAKKGYKIIRRGDRIMVQQPPGERNALGFLKFMF
PNQHAVYLHDTPNRNLFSASKRAFSHGCVRVDKPFQLAEEIMGKDGKWTEEKLRGLIGKG
ERTVHLTNPLPVHLTYFTLTVDEKGEMKRFEDLYGLDRKVRAALNLSE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgtgcgcaagacggcactgtggcttggtctcattggatctgtctccctcttc
cccttgtctgccctcgcggacgatgcggcccaaccccaggccgatttggtccagaccgct
ccggcagagccctccttccacgatgtcgccgctcaggacgccgacgctcggaaggatacg
gccgctcaagccgtcccgctgcccgagcccgcgcccgtcacgatcgaggcggtcgacctc
aaggccgctcccgccatcgacattcccctgccggatgcggctcccgtgacggccctgatg
cagaccgatctcttccgcatggccgtggagggattgttcgcggacgatgccgccatgcgc
gagatgcgcgtgagcgccaaggaccgggaggcgctgcaggccttctacgcgcaggccgag
cgcccgctggtctgggcgcgggacggcgcctggtcgcccgccgccttgggcgcgatggaa
cgcctgaaggccgccgacgaggacggtctcgatccgaccgattattccttgcccgaccgg
ggcctgcgcagggatgcgaatccggcgcaatgggcccaggccgatgtgcgactctccctg
tcggtgatccgctatgcccgcgatgcccgcggagcgcgcatcgacctcgcgcggctctcc
ccgctcgtgacgccgaagctcgccctgccggccgtcgacgaggtgctgagcaaggtctcc
accgccggcgatgcgggcggagcgctcgaggcctacaacccgccccatgccggctacaag
gccctgaaggaaaagctggcgaaactgcgcgagagccatccctcgcagccgagcgtgcgt
ctgccgcgcggcccggtcctgcgcgtgggcatgaaggatccgcgcgtgcccctgatccgg
gctcggttcaacctcacgaaggaagcgaacaaccagacggtctacgacgagcgcgtggct
tccgccgtggcggccttccagaaggagaagggcctgccggacacgggcgtcctgaatgcc
cagacggtggcggccctctccggtccctcggtggcgcaacggcaatccgacctgatcgcc
aacatggaacgctggcgctggctgccggccaatctggggcagcggcacatcatggtgaac
gtgcccgaattccgcctgcagatggtcgaaggacgcgacacggtctatcagacgcgggtc
atcgtcggcaaagagcagtcgcagacgccgatcttctccgaggacatgaagtacctcgtg
gtcaatccgtcttggacgatcccgccgtcgatcatgaagaaggagatcctcccggcgctc
gccaacgaccccgactacgcggcgaagaagggctacaagatcatccggcgcggcgatcgg
atcatggttcagcagccgccgggcgagcgcaatgcgctgggcttcctgaagttcatgttc
cccaaccagcatgcggtctatctgcacgatacgccgaaccgcaatctcttctccgccagc
aagcgcgccttcagccatggctgcgtgcgcgtcgacaagcccttccagcttgcggaagag
atcatgggcaaggacggcaagtggaccgaggagaagctgcggggcctcatcggcaagggc
gagcgcaccgtgcacctgaccaacccgctgcccgtgcacctgacctacttcacgctcacg
gtcgacgagaagggcgagatgaagcgcttcgaggatctctatggcctcgaccgcaaggtc
cgggccgctctcaacctgtccgagtag
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